Pseudomonas sp. SXM-1: DCC84_30240
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Entry
DCC84_30240 CDS
T11095
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pssx02000
]
DCC84_30240
Transporters [BR:
pssx02000
]
Other transporters
Pores ion channels [TC:
1
]
DCC84_30240
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QBQ13765
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Position
6409118..6411013
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AA seq
631 aa
AA seq
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MNRLRLALPLLLLPATDLLADSFERDQALKLPDMVISANRQVQARNDSSAANTVFTRDDI
DRLQPTSVTDLLSRVPGVQVSQAGGRGSLASVYIRGTKSAQSLVLVDGQRIGNSTSGDSN
LQHLNIQQIERVEVLRGSRSVIYGSDAIGGVIQIFTRRGNESGLQPRLHVGFGSNQTWER
SLGLSGGDAQTRFNLGASLDDTAGINRTYDSYPSDRDHDAYRNQTISFSLSHAFNDDLEA
GVNVLDNRGKSEFDNPFGRFDSTTFQSFQQKPYTHFTVSSVSTYVDARINDTWKSRLEAG
HSENREETRDKLSTERSVFNTYRNSLNWQNDLTLNEQNSLILGGDWYEDQVNSSTAFAED
SRWNRAAFIQHRFQAQSFSTELGLRRDDNQQFGGHNSWSGTFTLPLNPDNDLLLSYSEGF
RAPTFNDLYYPDEFGFKNSNPNLKPETSKSYEVQWRSQLSDSSRLEASLYRTDIQDAIVF
ASNGPQNVSAARINGFEAALKQELFGWQSSLAVALIDPRDRDTGRTLARRARRTLSLDLD
RQFDQFGVGASWQAVSSSYDDAANQQRLGGYGLLGLQGSWAVNHEVTLEMKLDNLLNKDY
SRALYQYQGQQYGYREEGRALMFGVTWTPEL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgccttcgcctcgccctgccccttctgttactgcccgccaccgacctgctcgcc
gacagtttcgaacgcgaccaagccctcaagctgcccgacatggtgatcagcgccaaccgc
caggtccaggcgcgcaacgacagcagcgccgccaacaccgtcttcacccgcgacgacatc
gaccgcctgcaacccaccagcgtgaccgacttgctcagtcgcgtgcccggcgtgcaggtt
tcacaggccggtggccgtggcagtctggcaagcgtctacattcgtggcaccaagtcggcc
cagagcctggtgttggtcgacggacagcgcatcggcaactcgacttccggcgacagcaac
ctgcagcacctgaacatccagcagatcgaacgcgtggaagtcctgcgtggttcgcgctcg
gtgatctacggcagcgatgcgattggcggggtgatccagattttcacccggcgtggtaac
gagtccggcctgcaaccccgcctgcatgtgggatttggcagcaaccagacgtgggaacgc
agcctgggcttgtccggcggcgatgcgcaaacccgcttcaacctcggcgccagcctggat
gacacggcgggaatcaatcgcacgtacgactcctatcccagcgaccgtgaccatgacgcc
tatcgcaaccagaccatcagtttcagcctgagccatgccttcaacgatgacctcgaagcg
ggtgtgaacgtgctggataaccgcggcaaaagcgaattcgacaacccgttcggtcgcttc
gattcgaccaccttccaaagcttccagcaaaagccctacacccacttcaccgtgagcagt
gtcagcacctatgttgacgcgcgtatcaatgacacgtggaagtcccggctggaagcgggc
cacagcgaaaaccgcgaagaaacccgggacaagctcagcaccgaacgcagcgtgttcaac
acttaccgcaactcactgaattggcagaacgacctgaccctcaatgagcagaacagcctg
atcctgggcggcgactggtacgaggaccaggtcaacagcagcacagcgttcgccgaagac
agtcgctggaatcgagcggcgtttatccagcaccgttttcaagcccagtccttttccact
gaactgggcctgcgtcgcgacgataaccaacagttcggcggccacaacagttggagcggc
accttcaccctgccgctgaacccggacaatgatctgttgctgagctacagcgaaggcttc
cgcgcgcctacgttcaacgacctctactacccggacgaattcggcttcaaaaacagtaac
ccgaacctcaagcccgagacatcgaaaagctacgaagtgcaatggcgcagccagctcagc
gacagcagccgactggaagcctcgctgtaccgcaccgatattcaggatgcgatcgtgttt
gccagcaacggcccgcaaaacgtcagcgccgcacgcatcaacggcttcgaggcggcgctc
aagcaagaactgttcggctggcaaagcagcctcgccgttgcattgatcgacccacgcgac
cgcgacaccgggcgcacactggcgcgtcgagcccggcgcaccctgagcctggacctggat
cgccaattcgatcaattcggcgtcggcgccagctggcaagcggtgagcagcagctacgac
gatgcggcgaaccagcaacgcctgggcgggtatggcttgctggggctacagggcagttgg
gcggtgaaccatgaagtcacgctggaaatgaagctcgataacctgctgaacaaggactac
agccgggcgctgtatcagtatcaaggccagcaatatggctatcgggaagaaggccgggca
ctgatgttcggggtgacctggacgccggaactctaa
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