KEGG   Pseudomonas sp. SXM-1: DCC84_30285
Entry
DCC84_30285       CDS       T11095                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pssx  Pseudomonas sp. SXM-1
Pathway
pssx00740  Riboflavin metabolism
pssx01100  Metabolic pathways
pssx01110  Biosynthesis of secondary metabolites
pssx01240  Biosynthesis of cofactors
pssx02024  Quorum sensing
Module
pssx_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pssx00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    DCC84_30285 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DCC84_30285 (ribD)
Enzymes [BR:pssx01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     DCC84_30285 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     DCC84_30285 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Phage_Gp84
Other DBs
NCBI-ProteinID: QBQ13774
LinkDB
Position
complement(6416936..6418072)
AA seq 378 aa
MNPPSAEQAVLDAHYMARALELARKGLYTTHPNPRVGCVIVRDGQVVGEGWHVRTGEPHA
EVHALRAAGDKARGATAYVTLEPCSHHGHTPPCADALVNAGLARVVAAMQDPNPEVAGRG
MRRLAQAGIETHSGLLENEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMANGESQWI
TGPAARAAVQRLRAQASVVLTGADTVLADGARLTVRAAELGLDEETTALAMSRPPLRVLI
DGRLRVPLNAPFFKAGPALVITCVTPDNQYPTGPECLVVPGVDGQVDLRSALVALAARGV
NEVLVEAGPSLAGAFAQQGLVDEYVIFVAGKFLGSAARPLLDWPLEKLADAPQLKITEMR
AVGDDWRVTAIPLPSASV
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgaacccaccttcggcagaacaagcggtactcgacgcccattacatggcccgtgccctg
gaattggcgcgcaagggcctgtacaccacccaccccaacccccgggttggctgcgtgatc
gtgcgtgacgggcaggttgtcggcgaaggctggcacgtgcgcaccggcgaaccccatgcg
gaagtccacgccctgcgggctgcgggcgacaaagcccggggcgccacggcctacgtgacc
cttgaaccgtgcagccaccacgggcacacaccgccgtgcgccgatgccttggtgaatgcc
ggcctggcccgtgtggtggcagcgatgcaggacccgaatccggaagtcgccgggcgtggc
atgcgccgcctggcccaggccgggatcgagacccacagcggcttgctggaaaacgaagcg
cgggcgcttaacccgggctttctcaagcgcatggagcatggcctgccgtttgtgcgggtc
aagttggccatgagcctggacggtcgcaccgcgatggccaacggcgaaagccaatggatc
accggcccggccgcccgtgccgctgtgcagcgcctgcgtgcccaggccagtgtggtgctg
accggcgccgacacggtgctggccgatggtgctcgcctgaccgtgcgcgccgccgaactg
ggtctggatgaagaaaccaccgccctggcgatgtcccgtccgccgctgcgtgtgctgatc
gacggccgcctgcgggtgccgctgaatgcgccgttcttcaaggctggccccgcgctggtc
atcacctgtgtgacgccggacaaccagtaccccacaggccccgagtgcctggtggtgccg
ggtgtcgacggccaggtcgacctgcgttccgcgctggtggccctggcggcccgtggtgtc
aacgaagtgttggtggaagccggcccaagcctggcgggtgccttcgcccagcaagggctg
gtggacgagtacgtgatattcgtcgccggcaagtttcttggctctgccgcccggcctttg
ctggactggccgcttgagaaactggccgacgccccccaactcaagatcactgaaatgcgc
gctgttggcgatgactggcgagtcactgccatccctctgccatcagcgagcgtataa

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