Pseudomonas sp. SXM-1: DCC84_30375
Help
Entry
DCC84_30375 CDS
T11095
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pssx02000
]
DCC84_30375
Transporters [BR:
pssx02000
]
Other transporters
Pores ion channels [TC:
1
]
DCC84_30375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
QBQ13791
LinkDB
All DBs
Position
complement(6435691..6437805)
Genome browser
AA seq
704 aa
AA seq
DB search
MLNLKTVLLLGTLLFCGSGALQAATAPAAPAPAAPAQPELLVEGGLLGAISSSIDDVQDK
LDLNQNLVDAWRLRADRAADEVDKLVNQPSERSSWSVAGDFLLLSGVWIGAFAALTLLGR
FIVKRLSLQRHIAPRQRLQALLGYLIPYTIPALICLPLTLYVSHFLPSSVGRALALCFAY
ATSSGIFSTSILLCVIVMFNVGHKRPAVKIIRDYCPKPLFLIGFLAALSDALTSPQIARQ
LGGNITASVAIFTGLFASVIFGMLVIRLRRPVAHLIRNRPLAQRLKHPAVQQSLRVFSGL
WYWPILLMVLVSAINLIGAGDDSQKALRCALFTTILLIGTVFLSTVLQHLFQSRSTMAVQ
RSSAYKERFLSLLHALLRIVMAIAFIEILGRIWGVSLFEFAQRNSVGRAISDSLSSIGLI
LLVTWLFWVVLDTAIQEALKPPVNKRSSRQPSTRVKTILPLLRNAVKIVLVVICAITTMA
NLGINVAPLLAGAGVVGLAIGFGSQQLVQDVITGLFIIIEDTLSIGDWVVLDSGHAGTVE
GLTIRTLRLRDGKGFVHSVPFGQIKAVTNQSRQFAYAFFSVQFTYDTDVDKAVELIREAG
QSIRDDVFLKYNLQGPLEVFGVDKMDLNGVVLTAQFRTVSGGQYAVSRAFNQRLKKLVDN
CAFVHFAQTYPQQVMLPQRVGQQVDEPEEEVPSSVVLTEQPRTQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttgttgaatttaaagactgtgctactgctcggcacgctgctgttctgcggcagcggcgcg
ctgcaagcggccaccgcccccgcggctccagcgcctgccgccccggcccagccggaactg
ttggtagaaggcggtctgctcggcgccatcagctccagcatcgatgatgtgcaggacaaa
ctcgacctcaaccagaacctggtcgacgcctggcggctgcgggccgaccgggcggcagat
gaggtggacaagctggtcaaccagccgtccgaacgttcctcgtggagcgtggccggggat
ttcctgttgttgtccggggtgtggatcggcgcgttcgccgcgctgaccctgctggggcgc
tttatcgtcaagcgcctgagcctgcagcggcatatcgcacctcgccagcgcctccaggcg
ttgctgggttacctgattccctacacgataccggcgcttatctgcctgccattgacgctc
tacgtcagccacttcctgccctcctcggtgggccgtgcgctggcgctgtgttttgcctac
gccaccagcagcggcattttctccacctcgatcctgttgtgcgtgatcgtcatgttcaac
gtcggccacaagcgcccggcggtgaagattattcgggactactgccccaagccgctgttc
ctgatcggcttccttgccgccctcagcgatgcgctgaccagcccacagatcgcccgccaa
ctggggggcaatatcaccgccagtgttgcgatcttcaccgggctgtttgcctcggtgatc
ttcggcatgctggtgattcgcctgcgccgtccggtggcgcatttgatccgcaaccggccc
ctggcccagcgcttgaaacacccggcggtgcagcaatcactgcgggtgttttccggcctg
tggtattggccgatcctgctgatggtgctggtgtcggcgatcaacctgatcggcgccggc
gacgacagccagaaagccctgcgctgtgcgctgttcaccacgatcctgctgatcggcacg
gtgtttctcagcacagtgttgcagcacctgttccagtcccgcagcacgatggcggtgcag
cgcagcagcgcctacaaagagcgtttcctaagcctgctgcacgcgctgttgcgcatcgtg
atggccatcgcctttatcgaaatcctcgggcgtatctggggcgtttcgctgtttgagttt
gcccagcgcaactccgtgggccgggccatcagtgattccctgagcagcatcggtttgatc
ctgctggtgacctggctgttctgggtggtgctcgacacggcgattcaggaagcattgaaa
cccccggtcaacaaacgctccagccgccagcccagcacgcgggtgaaaaccatcctgccg
ctgctgcgcaacgcagtgaaaatcgtcctggtggtgatctgcgcgatcaccaccatggcc
aacctggggatcaacgtcgcaccgctgctggcgggcgccggggtggtgggcctggccatt
ggttttggctcccagcaactggtgcaggatgtaatcaccgggctgttcatcatcatcgaa
gacaccctgtcgattggcgattgggtggtgctcgactccggccacgccggtaccgtcgag
gggctgaccatccgcaccctgcgcctgcgggacggcaagggctttgtgcattcggtgccg
ttcgggcagatcaaggccgtcaccaaccaatcgcggcaattcgcctatgcgttcttctcg
gtgcagttcacctacgacaccgatgtcgacaaggccgtggagctgattcgcgaggcggga
cagtcgatccgcgacgacgtgttcctcaagtacaacctgcaagggccgctggaggtattt
ggcgtcgacaagatggacctcaacggcgtggtgctgacggcgcagttccgcacggtgtcg
ggtgggcaatatgcggtgagccgcgcgtttaaccagcgcttgaaaaagcttgtggataac
tgtgcctttgttcacttcgcgcaaacttatccacagcaggtgatgctgccgcagcgggtc
gggcagcaggtggatgagccggaggaagaagtgccttcgtcggtggtgcttaccgagcag
cctagaacccaatag
DBGET
integrated database retrieval system
