Pseudomonas sp. SXM-1: DCC84_30465
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Entry
DCC84_30465 CDS
T11095
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DCC84_30465 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pssx03021
]
DCC84_30465 (rpoA)
03400 DNA repair and recombination proteins [BR:
pssx03400
]
DCC84_30465 (rpoA)
Enzymes [BR:
pssx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DCC84_30465 (rpoA)
Transcription machinery [BR:
pssx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DCC84_30465 (rpoA)
DNA repair and recombination proteins [BR:
pssx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DCC84_30465 (rpoA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QBQ13809
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Position
complement(6456614..6457615)
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AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VIEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgacaccccgtcacattgatgtgcaggttgtcagt
ccaacccgcgccaagatcactctcgagcctctcgagcgtggttttggccacaccctgggc
aacgcgctgcgccgcatcctgttgtcctcaatgcccggctgtgcagtagtcgaggccgag
attgacggtgtgctccacgagtacagcgccatcgaaggtgtacaggaagacgtaattgaa
atcctgttgaaccttaaaggtctggctatcaagctgcacggccgtgacgaagttacgctg
accttgtcgaagaagggttcgggggtggttaccgctgccgatattcagctggatcatgat
gtcgagatcgttaatcccgatcacgtaatcgctaacctggcgtctaacggcgccctgaac
atgaagctcaccgtagctcgtggtcgtggttatgaaccggccgactcgcgtcagagcgat
gaagacgaaagccgcagcattggtcgcttgcagctcgactcttcgttcagcccggttcgc
cgtatcgcatacgtggtggaaaacgcccgtgtcgaacagcgtactaacctggacaagctg
gttattgatctggaaaccaacggtactctggatcctgaagaggctatccgccgcgctgca
accattctgcaacagcagttggctgcgttcgtcgacctcaagggtgacagcgaaccagtg
gtaatcgagcaggaagacgagatcgatccgatcctgcttcgcccggttgacgatctggaa
ctgactgtacgttcggctaactgccttaaggcggaaaacatttactacatcggtgatctg
attcagcgcaccgaagtagaactgttgaagactccgaacctgggcaagaaatccttgact
gaaatcaaggacgttctggcctcccgcggtctgtccctcggcatgcgcctcgacaactgg
ccgcctgcaagtcttaagaaggacgacaaggcgactgcctga
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