Pseudomonas sp. SXM-1: DCC84_31965
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Entry
DCC84_31965 CDS
T11095
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pssx03021
]
DCC84_31965 (rpoH)
Transcription machinery [BR:
pssx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DCC84_31965 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QBQ14082
LinkDB
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Position
complement(6747725..6748579)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNHNLHEALEVLDDRSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgctctggtcccgggtgcgaacctggaggcctat
gtgcacacggtcaacagcattccattgctgacgcccgagcaggagcgtgaactggccgag
agtctctactatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgtagctatagcggctacggcctggcccaggctgacctgatt
caggaaggcaacgttggcctgatgaaagccgtgaagcgcttcaacccggaaatgggtgtg
cgcctggtgtcgtttgctgtgcactggatcaaggcggaaattcacgaattcatcctgcgc
aactggcgcatcgtgaaagtcgcgaccaccaaggcccagcgcaaactgttcttcaacctg
cgcagccagaagaaacgcctggcgtggctgaacaacgaagaagtgcatcgcgtggccgaa
agcctcggcgtagagccacgtgaagtgcgcgagatggaaagtcgcctgaccggccatgac
atggccttcgacccggccgccgaagcggacgacgacagcgccttccaatcgccggccaac
tacctggaagaccaccggtacgacccggcgcgtcagctggaagatgccgactggagcgac
aactccaatcacaacctgcacgaagcgctggaagtgctggacgaccgcagccgtgacatt
ctctaccagcgctggttggcagaagaaaaagccacgctgcacgacctggcgcagaagtac
aacgtgtcggccgagcggattcgtcagctcgagaagagtgcgatgaacaagctgaaactg
tcgatcgccgcctga
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