Pseudomonas sp. SXM-1: DCC84_32835
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Entry
DCC84_32835 CDS
T11095
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx00300
Lysine biosynthesis
pssx00470
D-Amino acid metabolism
pssx01100
Metabolic pathways
pssx01110
Biosynthesis of secondary metabolites
pssx01120
Microbial metabolism in diverse environments
pssx01230
Biosynthesis of amino acids
Module
pssx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DCC84_32835 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DCC84_32835 (dapF)
Enzymes [BR:
pssx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DCC84_32835 (dapF)
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NCBI-ProteinID:
QBQ14247
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Position
6923993..6924823
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKLWGDRHTGVGFDQLLLVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDIRSDGQIGVNM
GAPRLVPADIPFQATEQALSYPVDVDGKTVNLAAVSMGNPHAVLRVDDINNAPVHELGPK
IENHPRFPARVNVGFLQVIDRSRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVKMTGPATRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcgttttaccaagatgcacgggctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcacatcctgcccaagcacgccaagctgtggggcgaccggcacacc
ggtgtcggcttcgaccaattgttgctggtggaagcgccgagtaacccggaagtggatttc
cgttaccggatcttcaactccgatggctccgaagtggaacagtgcggcaatggtgcccgc
tgtttcgcccgttttgtcctggacaagcgcctgaccgccaagcggcagattcgcgtcgag
accaaaagcggcatcatcgagctggatattcgcagcgacggccagatcggcgtcaacatg
ggcgcgccacggctggtgccggcggacattccgttccaggccaccgagcaagccctgagc
tacccggtggacgtggacggcaagaccgtcaacctggccgcagtgtccatgggcaacccc
catgccgtgctgcgggtggatgacatcaacaacgcgccggtgcatgaactggggccaaag
atcgaaaaccacccgcgctttcccgcgcgggtcaatgtgggcttcctgcaggtcatcgac
cgttcccgtgcgcagttgcgcgtgtgggaacgcggggccggcgaaacccaggcttgcggt
accggcgcctgcgccgctgccgtagccgcgatcagccaggggtggatggattcgccgctg
ctgatcgacctgcccggtggacgcctgtccatcgaatgggcaggccccggccaaccggtg
aaaatgaccggcccggccacccgcgtctacgaaggacaggtccgtctatga
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