Pseudomonas sp. 31-12: DJ564_02170
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Entry
DJ564_02170 CDS
T11624
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pssz Pseudomonas sp. 31-12
Brite
KEGG Orthology (KO) [BR:
pssz00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
DJ564_02170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
OB_PDCD11
T2SSK
HHH_6
DUF22
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AWM89691
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Position
complement(469906..472230)
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AA seq
774 aa
AA seq
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MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDIQLRHLEERLRY
LRELDERRISILASIEEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPTLTPDAEAARFVDAEKGVADVKAALEGAKYILMERFAEDAGLLDKLRS
YLKQEATLSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQQFGIQNQNRAADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLSAPAGPRATLGLDPGLRTGCKVAVVDSTGKLLDHATVYPHVPHN
KWDQTIAILAALCAKHSVDLIAIGNGTASRETDKLAAELIKKYPAMKMTKVMVSEAGASV
YSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVSHRDEHGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDASFLKRLDP
KKYTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQEGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIRDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSAPRQSQNNAPRKETTAAAPANNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaggaactcggtgtacgcccacaacaggtcgaa
gcggccgtcgcgctactcgatgagggctctaccgttcccttcatcgcccgttaccggaaa
gaagtgaccggcagcctcgatgacattcagttgcgtcatctggaagagcgtctgcgctac
ctgcgagaactcgacgaacggcgcatcagcatcctcgccagcatcgaagagcaaggcaag
ctgaccccgcagctcgaacgcgacatcaagctcgccgacaccaagacccgcctcgaagac
ttgtacctgccgtacaagcagaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgagctggccgacggcctgttcaacgacccgaccctgacgccagacgctgaagcc
gcgcgcttcgtcgatgccgaaaaaggcgtcgccgatgtgaaagccgccctcgaaggcgcc
aaatacatcctgatggaacgcttcgccgaagacgccggcttgctggacaaactgcgcagc
tacctcaagcaggaagccaccctcagtgcccgcgtcatcgccggcaaggaagaggaaggc
gccaaattccgcgactacttcgaacacgacgagccgctgaaaagcatgccgtcgcaccgc
gcgctcgccattttccgaggccgtaacgaaggcattctgagttcggcgctgaaagtcggc
gacgagctgccgggcaccatgcacccgtgcgaaggcatgatcggccagcaattcggcatc
cagaaccagaaccgcgctgccgacaaatggctgggcgaagtggtgcgctggacctggaag
gtcaagctttacacccacctcgaaaccgatttgctgggcgagctgcgcgatggcgcggaa
accgaagcgatcaacgtgttcgcccacaacctgcacgacttgctgctgtcggccccggcc
ggtccgcgcgccaccctgggcctcgacccgggtctgcgcaccggctgcaaggtcgccgtg
gtcgattccaccggcaaactgctggatcacgccacggtttacccgcacgtgccgcataac
aagtgggaccagaccatcgcgattctcgccgccctgtgcgccaagcactcggtcgacctg
atcgccatcggcaacggcaccgccagccgtgaaaccgacaagctcgccgctgagctgatc
aaaaaatacccagccatgaagatgaccaaggtcatggtctctgaggccggtgcatcggtt
tactcggcatcggaactggcttccaaggaattcccggacctcgacgtgtcgatccgtggc
gcggtgtcgattgcccgtcgcctgcaggatccgctggccgaactggtgaagatcgatccg
aaatccatcggcgtcggtcagtaccagcacgacgtgtcgcagctgaaactggcgcgcggc
ctggacgctgtggtcgaagattgcgtgaacgccgtgggcgtcgacgtgaacactgcctcc
gtggcgctgctggcgcgcatctccggcctcaacgcgaccctggcgcagaacatcgtcagc
caccgcgacgagcacggcgcattcaaaacccgcgccgcgttgaagaaagtcgcacgcctg
ggtgaaaaaaccttcgaacaggccgccggtttccttcgtgtcatgaacggcgacaacccg
ctggattcgtcggcggttcacccggaagcctatccgctggtgcagcgcattgccgctgag
accgaccgtgacattcgttcgctgatcggcgatgcgagcttcctcaaacgtctcgatccg
aagaagtacaccgacgagactttcggtctgccaacggtcaccgacatcctgcaagagctg
gaaaaacccggtcgcgacccgcgtcccgagttcaagactgccgagttccaggaaggcgtc
gaagacttgaaggatctgcaactgggcatgatcctcgaaggcgtggtaaccaacgtgacc
aacttcggcgcgttcgtcgacatcggcgtgcatcaggacggtttggtgcacatctccgcg
ctttcggagaagttcatcagggatccgcgtgaagcggtgaaggctggtgacgtggtgaaa
gtgaaggtcatggaagtcgatatcccgcgtaaacgcgtgggtctgtcgatgcgcatgagc
gacaccccgggcgagaaaatcgacggtgcccgtggcgcacgtccggggtcggctccacgc
cagtcccagaacaacgcaccgcgtaaagaaaccacggcggcggcccccgccaacaacgcc
atggcttcgctgttcgccaacgccaagcagttgaagaaacgttga
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