KEGG   Pseudomonas sp. 31-12: DJ564_02350
Entry
DJ564_02350       CDS       T11624                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
pssz  Pseudomonas sp. 31-12
Pathway
pssz00521  Streptomycin biosynthesis
pssz00523  Polyketide sugar unit biosynthesis
pssz00525  Acarbose and validamycin biosynthesis
pssz00541  Biosynthesis of various nucleotide sugars
pssz01100  Metabolic pathways
pssz01110  Biosynthesis of secondary metabolites
pssz01250  Biosynthesis of nucleotide sugars
Module
pssz_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:pssz00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    DJ564_02350 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    DJ564_02350 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    DJ564_02350 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    DJ564_02350 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    DJ564_02350 (rfbB)
Enzymes [BR:pssz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     DJ564_02350 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short KR Sacchrp_dh_NADP NAD_binding_10
Other DBs
NCBI-ProteinID: AWM89725
LinkDB
Position
complement(504548..505630)
AA seq 360 aa
MRILITGGAGFIGSALIRYLIRHTEHEVLNLDKLTYAGNLESLTSIATDTRYEFVQADIV
DQATVSAVLARFQPQAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLDATRAYWQTLAE
PEKSAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLFVEDHARALLKVVT
EGVVGETYNIGGHNEQKNIDVVRGICALLEELAPNKPEGVAHFADLITFVQDRPGHDLRY
AIDASKIERELGWVPEETFETGLRKTVQWYLDNLEWCRRVQDGSYQGERLGAINTKELLA
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgcgtattctcatcaccggcggtgccggtttcattggctctgccctgattcgctacctg
attcggcacactgagcatgaagtgctcaacctggacaaactgacctacgctggcaatctc
gagtcgctgaccagcattgccaccgacacccgctacgagttcgtccaggccgatatcgtc
gaccaggccaccgtgagcgcggtactggcacgcttccagccgcaggcgatcatgcacctg
gcggcagaatcccacgtcgaccgttccattgacggtccgtcggatttcatccagaccaat
atcgtcggcacctacagcctgctggatgccacccgcgcctactggcagacgctggccgag
ccggaaaaaagcgccttccgcttccatcacatctctactgatgaggtctacggcgacctg
cacggcgtcgatgatctgttcaccgaaaccacgccctacgcaccgagctcgccgtactcc
gcgagcaaagcggcgtccgaccatctggtccgcgcctggcagcgcacctacggcctgccg
gtattgctgaccaattgctcgaacaactacgggccgttccacttcccggaaaaactgatt
ccgctggtgatcctcaacgccttggccggcaagcctttgcctgtttacggtaacggcctg
caagtacgcgactggctgtttgtcgaagatcacgcccgggcgctgctcaaagtggtcacc
gaaggcgtggtcggcgagacctacaacattggcggtcacaacgaacagaagaacatcgac
gtggtgcgtggcatctgcgcgctgcttgaagaactggcgccgaacaagcctgaaggcgtg
gcgcacttcgccgacctcattaccttcgtccaggaccgtccgggtcacgacctgcgctac
gccatcgacgcgagcaagatcgaacgcgaactgggctgggtgccggaagaaaccttcgaa
accggcctgcgcaaaaccgtccagtggtatctggataacctggagtggtgccgccgcgtt
caggacggcagctatcagggcgaacgcctgggcgccatcaataccaaggagctgctcgca
tga

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