Pseudomonas sp. 31-12: DJ564_07500
Help
Entry
DJ564_07500 CDS
T11624
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pssz Pseudomonas sp. 31-12
Brite
KEGG Orthology (KO) [BR:
pssz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pssz03021
]
DJ564_07500
Transcription machinery [BR:
pssz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
DJ564_07500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AWM90678
LinkDB
All DBs
Position
complement(1626790..1629636)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGETRQYALRNAPLTRVRFSPG
DSITHFEGWKLTVQEVDDVDGLLVYHGLNAQNEVVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYNTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
ANPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEEKASPEYTLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLHAFRAESENYRPVAEAVQELLDK
GRLSPEAHKTIHGFLGNEGEALLAAVNDGDIEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPDEYLELPLGDHAELYPEVSFQAQPDANEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHIIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGSRLLPLLENADDGEWQALIDEARAERERLE
AELHTGRDRLLELNSGGAGEGDALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDTTGNDLSARVSF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKIFPRHAERVAEAKRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRQQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagccgagctgggt
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gagactcgccagtacgcgctacggaatgcgcccctcacccgcgtgcgtttctcgccgggc
gactccatcactcacttcgaaggctggaaactgaccgtccaggaagtcgacgacgtcgac
ggcctgttggtctaccacggcctcaacgcgcaaaacgaagtggttaccctgccggaaacc
cagctgtcgaacttcattcagttccgtctggccagcgaccgtctgttcgccggacagatc
gacccactggcgtggttctccctgcgctacaacacccttgaacacaccagccgccagttg
caatcctcgctctggggcttgggcggcgtgcgtgcgcaaccgatcgcgcatcagctgcac
atcgcccgtgaagtcgccgaccgcattgcgccgcgagtactgctggccgacgaagtgggc
ttgggcaaaaccatcgaagccggcctggtgatccatcgccaactgctctcgggccgcgcc
aaccgcgtactgatcctggtgccggagaacctgcagcaccagtggctggtcgagatgcgc
cgtcgcttcaacctgcaagtcgcgctgttcgacgaagaacgcttcatcgaaagcgatgct
gccaacccgttcgaagacacccaactcgcgctggttgcgcttgagtggctggtggacgac
gagaaagcccaggacgcgctgttcgctgccggctgggacctgctggtggtcgacgaagcg
caccatttggtgtggcacgaagagaaggccagccctgaatacacgctggtcgagcaactg
gccgaagtcattcccggtgtattgctgctgaccgcgaccccggagcaactgggccaggac
agccacttcgcgcgcttgcgcctgcttgacccgaaccgtttccatgacctgcacgccttc
cgcgccgagagcgaaaactatcgccctgtggccgaagccgttcaggagctgctggacaag
gggcgcctgtcgccggaagcacacaagaccatccacggtttcctcggcaacgaaggcgaa
gcgctgctggccgccgtgaacgatggcgacattgaggccagcgcccgtctggtgcgcgaa
ctgctggaccgccacggcaccggccgcgtgctgttccgtaacacccgcgctgccgtgcag
ggtttcccggagcgcaaactgcacccgtacccgctgccgtgcccggatgaatacctcgaa
ctgccgctgggcgatcacgccgagctgtacccggaagtcagctttcaggcccagccggac
gccaacgaagaagaacgctggtggaaattcgacccgcgcgtcgagtggctgatcgatcag
ctgaaaatgctcaagcgcaccaaagttctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgttccggtattccggccacggtcttccacgaaggc
atgaacatccttgagcgtgaccgcgccgccgcctatttcgccgacgaagaatttggtgcg
caagtgctgatctgctcggaaatcggcagtgagggtcgcaacttccagttctcgcaccac
ttggtgctgttcgatctgccgtcgcacccggacctgctggaacagcggatcggtcgtctg
gaccggatcggtcagaagcacatcatcgaactgcacgtgccgtacctggaaaccagcccg
caagagcgcctgttccagtggtaccacgaagcactgaacgctttcctcaacacctgcccg
accggcaacgccttgcagcatcagttcggctcgcgtctgttgccactgctggaaaacgcc
gatgacggcgagtggcaagcgctgatcgacgaagcccgcgccgagcgtgagcgtctggaa
gccgagctgcacaccggccgtgaccgcttgctggaactcaactccggcggtgctggcgaa
ggtgatgcactggtcgaggacatcctcgagcaggacgatcagttcgccctgccgatctac
atggaaaccctgttcgacgctttcggcatcgacagcgaagaccattcggaaaacgccctg
atcctcaagccgagcgaaaaaatgctcgacgccagtttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgtaaccaggcgctgtctcgcgaagacatgcagttcatcact
tgggaacatccgatggtgcagggcggcatggacctggtcctgtccggctcaatgggcaac
accgccgtggcgctgatcaagaacaaggcgctgaaacctggcaccgtgttgctggaactg
ctctacgtcagcgaagtggttgcgccgcgctcgctgcaactgggccgctacctgccgccg
gccgctctgcgctgcctgctcgacaccactggcaatgacctgtcggcccgggtgtcgttc
gagaccttgaacgaccagttggaaagcgtgccccgtgccagcgccaacaagttcatccag
gctcagcgcgatcaactgacgccacggatcaacgccggcgaagagaaaatcttcccgcgt
cacgccgagcgcgttgccgaggcgaagcgtcgtctggcagcggataccgacgaagagctg
gcgcgtttgaccgcactgcaagcggtcaacccgaccgtgcgcgacagtgagctggttgcc
ctgcgccaacagcgcgagcaaggtttggccatgctcgacaaggctgcgctgcgactggaa
gcgattcgggtgctggtggcgggttaa
DBGET
integrated database retrieval system
