Pseudomonas sp. 31-12: DJ564_10605
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Entry
DJ564_10605 CDS
T11624
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pssz Pseudomonas sp. 31-12
Pathway
pssz03030
DNA replication
pssz03430
Mismatch repair
pssz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pssz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DJ564_10605
03430 Mismatch repair
DJ564_10605
03440 Homologous recombination
DJ564_10605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pssz03032
]
DJ564_10605
03400 DNA repair and recombination proteins [BR:
pssz03400
]
DJ564_10605
Enzymes [BR:
pssz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DJ564_10605
DNA replication proteins [BR:
pssz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DJ564_10605
DNA repair and recombination proteins [BR:
pssz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DJ564_10605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
ResIII
AAA_14
TIP49
AAA_18
AAA_30
AAA_2
AAA_19
PIF1
TsaE
nSTAND3
AAA_7
HasA
Rad17
zf-CXXC
SKI
Mg_chelatase
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AWM91242
LinkDB
All DBs
Position
2282423..2284504
Genome browser
AA seq
693 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGECSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVYDVLHSLIEGDAKALLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTADAPRQPLKPVGISQATVDSANSVAAAPVVAPVVAAAVAPVVPAPEPVAAAVAAPAP
EPVAPVVVTEHVVEPVAVEAVVDLPWNDPVEPEPVQQPAVEPVLETASEQPDLPPMPLPT
PDSVVPDAPEWAAAPIPEPSVAEVDAATPGVDLDDEPPLDEDYIEPDMDSAYSYLDELAS
EHTAEPAPEAEPEPAAMPATGLALQWLELFPKLPISGMTGSIAANCTLIAVDGDNWLMHL
DPAHSALFNATQQRRLNDALNQFHGRTLTLTMELIKPEQETPAQAASRRRANRQREAEES
IHGDPFIQQMMQQFGAVVRNDTIEPVEALVSQG
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccagcggctgcaccacgcc
tacctgttcaccggtacacgcggggtcggcaagaccaccatcgcgcgcatcatcgccaaa
tgcctgaactgtgaaacaggtatcacttcgacgccttgcggcgagtgctcggtatgccgt
gaaatcgatgaagggcgcttcgtcgacctgatcgagatcgacgccgcgagccggaccaag
gtcgaggacacccgcgaactgctcgacaacgtgcagtacgcgccgagccgcgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagccattccttcaatgcgctgttg
aaaacccttgaagagccgccgccctacgtcaagttcatcctggcgacgactgacccgcag
aaacttcctgcaaccattctgtcgcggtgcctgcagttctccctgaagaacatgaccccg
gagcgcgtggtcgagcatttgacccacgtgctgggtgtcgagaacgtaccgttcgaagac
gacgcgctgtggttgctgggccgcgccgccgacggctctatgcgtgacgccatgagcctg
actgaccaggccatcgccttcggtgaaggcaaggtcatggccgccgacgtgcgggccatg
ctcggcacgcttgatcacggtcaggtctacgacgttctgcattcgctgatcgaaggcgac
gccaaagccttgctcgaagccgttcgtcacttggccgaacaaggcccggactggaacggc
gtgctttcggaaattctcaacgtgctgcaccgtgtcgctatcgcccaggccttgcctgaa
ggcgtcgacaacggtcacggcgaccgcgatcgggtgctggccctggctcaagccttgccg
gccgaagacgtgcagttttattaccagatgggcctgatcggtcggcgcgatttgccgctg
gcgccggacccgcgtggtggcttcgagatggtcctgctgcgaatgctcgcgttccgaccg
gcggacacggccgacgccccgaggcaaccgctaaagccagtggggatcagccaggccaca
gttgattccgcaaattcagtggctgccgcgccggttgtggcgccagtagtcgctgcggca
gttgcacccgttgtgcccgcgcctgaacccgttgctgcggcggttgctgctccagcgcct
gagccggttgcgcccgttgtcgtgaccgagcacgtggtcgagcctgtcgcggttgaagcg
gtggtcgacttgccgtggaatgacccggttgagcccgaacccgtccagcaacccgccgtc
gagccggtcctggaaaccgccagcgaacaacccgatctgccgcccatgccgttgccgacg
cctgacagcgtggtgccggacgcgccggagtgggccgctgcgccgatcccggagccgtcg
gtggccgaagtcgatgccgccaccccgggcgtggacctggatgacgagccgccgctggac
gaagactacatcgagccggacatggattcggcctacagttaccttgatgaactggccagc
gaacacaccgctgaacccgcgccggaagccgagcctgagccggccgccatgcccgccacc
ggtctggcgctgcaatggctggagctgttcccgaaactgccgatctccggcatgaccggc
agcatcgccgccaactgcaccctgatcgccgtcgatggcgacaattggctgatgcatctg
gacccggctcacagcgccttgttcaatgccacccagcaacgccgtctcaacgatgcgttg
aaccagtttcacgggcgtacgctgaccctgaccatggagctgatcaagcctgagcaggaa
accccggcccaggccgcgtcccgtcgtcgtgcgaaccgtcagcgcgaggccgaggagtcg
atccacggtgatccgttcatccagcaaatgatgcagcagttcggtgcggtggtccgcaac
gatactattgaacctgtcgaagccctggtcagtcagggctaa
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