Pseudomonas sp. 31-12: DJ564_24980
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Entry
DJ564_24980 CDS
T11624
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pssz Pseudomonas sp. 31-12
Brite
KEGG Orthology (KO) [BR:
pssz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pssz03000
]
DJ564_24980
Transcription factors [BR:
pssz03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
DJ564_24980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
TetR_C_41
HTH_22
OSK
HTH_11
TniB
HTH_36
LacI
Motif
Other DBs
NCBI-ProteinID:
AWM93801
LinkDB
All DBs
Position
5293630..5294238
Genome browser
AA seq
202 aa
AA seq
DB search
MTAPQRLTDRKREAIIQAAIAEFRANGFDITSMDKIAATAGVSKRTVYNHFPSKEELFAE
ILNQLWARVTAEQETPYRPDLPLRDQMRLMLQAKLQMMGDDNFLDLARVAIAATIHSPER
AQNMVARMGEREEGLTVWIHAAQADGRLKPVAPEFAAQQIQGMLKSFAFWPQISMGLPAL
SDEMQSTVVESALDMFLACYQR
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgacagctccacagcgcctcaccgaccgaaaacgcgaagccatcatccaggcggcgatt
gccgaattccgtgccaacggtttcgacatcaccagcatggacaagatcgccgccaccgct
ggcgtgtcgaagcgcacggtgtacaaccacttccccagcaaggaagagttgttcgccgaa
atcctcaatcaactgtgggcgcgggtgacggccgaacaggaaacgccctaccgccctgac
ctgccgctgcgcgatcaaatgcgcctgatgttgcaggcgaaactgcagatgatgggtgat
gacaattttcttgatctggcacgggtggcgatcgccgccaccattcactctcccgagcgc
gcgcagaacatggtcgcccgcatgggtgagcgtgaggaaggcctgaccgtgtggatccac
gcagctcaggcggacggtcgattgaaaccggtcgcccccgaattcgccgcgcaacagatt
cagggaatgcttaaatcctttgcgttctggccgcagatttccatggggctcccggcgttg
tcggacgagatgcagagcaccgtggtggagtcggcgctggacatgttcctggcttgttat
cagcgctga
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