Pseudomonas sp. 31-12: DJ564_26340
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Entry
DJ564_26340 CDS
T11624
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
pssz Pseudomonas sp. 31-12
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
AAA_19
MCM
AAA_22
IstB_IS21
TIP49
OKR_DC_1_N
HTH_23
AAA_18
AAA_2
APS_kinase
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AWM94049
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Position
5583401..5584789
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AA seq
462 aa
AA seq
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MTHNVLVVDDEPKLCDLLASALGQNGIQVFTAGNGLHALKVLECEDIDLVISDWRMPGMD
GPQLLAEIKTRFPQLPVIVMTAYSTVKNAVQSMRNGAFDYIAKPFDIDELDITVSKALQF
RDILKDNQRMRAELDEHQQIDSLIGDSPSFRRVLHAIDSVRESNATILLTGESGTGKEMV
ARAIHKHGNRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLF
LDEIGEMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVANKEFREDL
YYRLNVFPIPLPALRERGEDIAPLARHFAHTLGATAGKRFTGFSPEALQAMANYSWPGNI
RELQNCVERATIVASGAVIEEEDLPAYLFASSSGSSGAVITEGSVPADLEAALAEVEKAY
ILAALAQSNGVQAAAAQLIGISERSFWYRLKKLGIHVDKIVR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacacataacgtactggtggtcgacgacgagcccaaactctgcgatttgctggcatcg
gccctgggtcagaacggcattcaggtgttcaccgccggcaatggcctgcacgcgctcaag
gtgctggagtgcgaggacatcgacctggtgatcagcgactggcgcatgcccggcatggac
ggcccgcaactgctggcggaaatcaaaacgcgctttccgcagctacccgtcatcgtgatg
accgcctacagcaccgtgaaaaacgccgtgcagtcgatgcgcaacggcgccttcgactac
atcgccaagccgttcgacatcgacgaactggacatcaccgtcagcaaggccctgcaattt
cgcgacatcctcaaagacaaccagcgcatgcgcgccgagcttgatgagcaccagcagatc
gacagcctgatcggcgacagcccgagcttccgtcgggtgctgcacgcgatcgattccgtg
cgcgaaagcaacgcgacgattctgctgaccggcgaaagcggcaccggcaaggaaatggtc
gctcgggcgatccacaaacacggcaaccgcgcggacaaaccgtttgtggcggtgaactgt
gcggcgatcccggaaggcctgctggaaagcgaaatgtttggtcaccgcaaaggcgcgttt
accggcgccgtggcggatcgcgtcgggcgcttcatgcaggccgacaagggcacgctgttc
ctcgatgaaatcggtgaaatgccgctggccctgcaggcgaaaatcctccgggccttgcag
gaacgggtgatcgagccggtgggcgatccacgcgagcgcaaggtcgatgtgcgggtgatt
gccgcgaccaacaagaacctgctggacgcggtggccaacaaagaatttcgcgaggacctt
tactaccgcctcaacgtgttcccgattccgctgccggccctgcgcgaacggggggaagac
atcgcgccgctggcccggcacttcgcacacaccctcggcgccacagcgggcaagcgcttt
accggattcagcccggaagccttgcaggcgatggccaattattcgtggccggggaatatt
cgcgagctgcagaactgcgtggagcgcgcgacgattgtggcgtcgggggcggtgattgaa
gaggaagatttgccggcgtatttgtttgcttcaagttccggtagcagtggcgccgtgatc
actgaaggcagcgtgccggcggatctggaagcggcgttggccgaggtcgagaaggcttac
attctggccgccctggcgcagagcaatggcgtgcaggctgcggcggcgcaattgatcgga
atctccgaacgcagcttctggtatcgactgaagaaactgggcatccacgtcgacaaaatc
gtcaggtaa
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