Pseudomonas sp. 31-12: DJ564_28540
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Entry
DJ564_28540 CDS
T11624
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pssz Pseudomonas sp. 31-12
Pathway
pssz03030
DNA replication
pssz03430
Mismatch repair
pssz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pssz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DJ564_28540
03430 Mismatch repair
DJ564_28540
03440 Homologous recombination
DJ564_28540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pssz03032
]
DJ564_28540
03400 DNA repair and recombination proteins [BR:
pssz03400
]
DJ564_28540
Enzymes [BR:
pssz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DJ564_28540
DNA replication proteins [BR:
pssz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DJ564_28540
DNA repair and recombination proteins [BR:
pssz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DJ564_28540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF8678
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AWM94446
LinkDB
All DBs
Position
complement(6041406..6042017)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPSSSCRATEIAVVILEQGRIVERYQSLMNAGVRVPAFIEQLTGIS
NAMLRTAPSAEQVMNEVNEFVGITPLLAHNAAFDQKFWDFELSRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFASLPNTGKAHRAMADAEMAANLTGHLLQELQQKHGLRELSHD
LLVSLQKVPAAKINEHLKRHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcatagcagtcatcgactttgaaaccaccgggatctccccgagcagcagctgc
cgggccacggaaattgccgtggtgatccttgaacaggggcgcatcgtcgagcgttaccag
agcctgatgaacgccggcgtgcgcgtccctgctttcatcgaacaactcactggcatcagc
aacgccatgctgcgcaccgcaccatcggccgagcaggtgatgaacgaggtcaacgaattc
gtcggcatcacgccgctgctggcgcacaacgccgcgttcgaccagaagttctgggacttc
gaactcagccgcatcaagcgcacccgcttgcagaacttcgcctgctcgctgctgctcgcc
cgccgcctgatgcccgccgcgccgaaccacaaactcggcaccctcaccaccttcgccagc
ctgcccaacaccggcaaggctcaccgggccatggccgatgcggagatggcggccaacctg
acggggcatctgcttcaggaactgcagcagaagcatgggttgcgcgagttgtcccatgat
ctgctggtcagcctgcagaaagtgccggcggcgaagatcaacgaacacctcaagcgccat
cgcgggttctga
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