Pseudomonas sp. 31-12: DJ564_28800
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Entry
DJ564_28800 CDS
T11624
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pssz Pseudomonas sp. 31-12
Pathway
pssz00550
Peptidoglycan biosynthesis
pssz01100
Metabolic pathways
pssz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pssz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DJ564_28800 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DJ564_28800 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pssz01011
]
DJ564_28800 (mrdA)
Enzymes [BR:
pssz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DJ564_28800 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pssz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DJ564_28800 (mrdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AWM94493
LinkDB
All DBs
Position
complement(6092958..6094853)
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AA seq
631 aa
AA seq
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MPQPIRIKDHEKDARLVRGRVVFGAIAVVLLICVLIARLYFLQVIQYEYHSTLSENNRVH
VQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQQVLDVIVEVLELTPEDRVIFE
KRMRQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYM
GRINEKELKSLDPVNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPKTGEVLAMVSAPSFDPNLFVTGIGF
KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDAGVVTASSRVYDPGYYQLPNY
DHKYRNWNRTGDGYVDLDTAIMRSNDTYFYDLAHKLGIDRLSAYMSKFGIGQKVSLDMFE
ESPGLMPTREWKRATRRQAWYPGETLILGIGQGYMQSTPLQLAQATALVANKGVWNRPHL
AKTVEGEKPKDENPIPDIVLRDPSDWTKVNHGMQQVMHGARGTARKAAIGAQYRIAGKSG
TAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADNPQIVVSVMVENGESGSGVAAPVVR
QIMDAWLLDQDGRLKAEYASPISAEATAREE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccccagccgatccgcatcaaggaccacgaaaaagacgcccgtctggtgcgtggccgc
gtcgtgttcggggcaattgcggtggtgttgctgatctgcgtgctgatcgcgcggctgtat
ttcctgcaagtgatccagtacgagtaccactcgaccctgtcggaaaacaaccgcgtccat
gtgcaaccgattccgccgacccgcgggctgatcttcgaccgcaatggcgtggtggtggcc
gataaccggcccagcttcagcctgagcatgacccgcgaacggtccggcgactggcagcaa
gtgctcgacgtgatcgtcgaagtgctggaactgacacccgaagaccgggtgatcttcgag
aagcgcatgcgtcaggggcgccggccgttcgagccggtgccgatcctgttcgagctgacc
gaagagcagatcgcccgcatcgcggtgaatcagttccgtctgccgggggtggaagtggtc
gcgcagctggtgcgtcactacccgcagggcccgcactttgcgcactcggtgggctacatg
gggcggatcaacgagaaagagctgaagtccctcgacccggtcaattacagcggcacccat
cacatcggcaaaacgggtatcgagcgtttctacgagcccgagttgcacggccaggtgggt
tacgaggaagtcgaaaccaacgctcggggccgcgtcttgcgtgtgctcaagcgtaccgat
ccgattcccggcaaggacatcgtcctgagcctggacatcaaattgcaggaagccgccgaa
gcggcgctcggtggtcgccgtggcgctgtggtagcgctcgatccgaaaaccggcgaagtg
ctggcaatggtcagtgcgccgagtttcgatccgaacctgttcgtcaccggcatcggcttc
aaagcctatgccgagctgcgcgactccatcgaccggccactgttcaaccgcgtgctgcgc
ggcctctacccgccgggctcgaccatcaagccggcggtggcgattgccgggctggatgct
ggtgtcgtgactgcgtcgagtcgggtctacgatcctggctattaccagttgcccaattac
gaccacaaataccgtaactggaaccgtaccggtgacggctacgtggacctggacacggcg
atcatgcggtccaacgacacctacttctacgacctggcccacaaattgggaatcgatcgc
ttgtcggcgtacatgagcaagttcggcatcggccagaaggtctcgctggacatgttcgaa
gagtcaccggggctgatgccgacacgggaatggaagcgtgcaacccgacgtcaggcctgg
tacccgggagagacactgattcttgggattgggcagggctacatgcagtccacgccgtta
cagctggcccaggccaccgcgctggtcgccaacaaaggtgtctggaaccgtccgcacctg
gccaagaccgtcgaaggcgagaagccgaaggacgaaaacccgataccggacatcgtcctg
cgcgacccgtccgactggaccaaggtcaaccatggcatgcagcaggtgatgcacggtgcc
cggggtacggcgcgcaaagcggcgatcggtgcgcaataccgcatcgcgggtaaaagtggt
accgcccaggtggtcgcgatcaagcagggcgagaagtacgaccgctccaaggttcaggaa
cgccaccgcgaccacgccttgttcgtcggctttgcaccggccgacaacccgcaaatcgtg
gtgtcggtgatggtcgagaacggcgagtccggttccggcgtcgccgcgcccgtggtgcgt
cagatcatggacgcctggcttctggaccaggacggccggttgaaggccgaatacgccagc
cctatcagtgcggaggctacggcccgtgaagagtaa
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