Pseudomonas syringae pv. tomato DC3000: PSPTO_0003
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Entry
PSPTO_0003 CDS
T00118
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSPTO_0003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_0003 (recF)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSPTO_0003 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_13
AAA_29
Aq_aa27
AAA_27
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AAO53560
UniProt:
Q88BK1
LinkDB
All DBs
Position
3039..4142
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AA seq
367 aa
AA seq
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MSLSRVSVTGVRNLHPVTLSPSPRINILYGANGSGKTSVLEAIHLLGIARSFRSSRLLPV
IQYEQPSCTVFGQVDLAQGGHSNLGVSRDRQGEFQIRIDGQNARSAAQLAEILPLQLINP
DSFRLLEGAPKIRRQFLDWGVFHVEPRFMSTWQRLQKALKQRNSWLRHGTLDAASQAAWD
RELCLASDEIDEFRRAYIKALKPVFEKTLSELVELEGLTLSYYRGWDKEKELSTVLASSL
NRDQQMGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQVRRGQCI
YLVDDLPSELDDNHRRALCRLLEELRCQVFITCVDQEFLREGWQTDTPVALFHVEQGRIT
QTHDHRE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttagtcgcgtctcggtcaccggggtgcgcaatctgcacccggtgaccctctcc
ccctccccgcgtatcaatatcctttacggtgccaacggcagcggcaaaaccagtgtgctg
gaagcgatccatctgctgggcatcgcccgctcgtttcgcagcagtcgtctgcttcccgtt
attcagtacgagcagccgtcatgtacggttttcgggcaggttgatctcgcgcaaggcggc
cacagcaatctgggtgtttcacgcgataggcagggtgaatttcagattcgcatcgacggc
cagaatgcacgcagcgctgcgcagcttgccgagatcctgccgctgcagttaatcaatcct
gatagcttccgattacttgagggcgcgccgaagattcgcaggcagtttctggactgggga
gtgttccacgtggaacctcgcttcatgtccacctggcagcgcctgcagaaggccctcaag
cagcgaaactcgtggcttcggcatggtacacttgacgccgcttcgcaggcggcatgggac
cgggagctgtgtttggcaagtgacgagatcgatgagtttcgtcgagcctatatcaaggca
ttgaagcccgtctttgaaaagactttgagcgaacttgttgaacttgaaggtttgaccctt
agctactaccgaggatgggacaaggaaaaagagctgagcactgtgctcgcctcctccctg
aatcgcgatcagcaaatgggccacacccaggcaggaccacaacgtgctgatctgcgcctt
agattaggtgcccacaacgcggcagatatcttgtcacgtggtcagcaaaaattggtggtc
tgtgcactgcgtattgctcaaggacacctggtcagccaggtccgtcgcggccagtgtatt
tacctggtggatgacttgccctccgaactggacgacaaccatcgacgcgcgctttgccgc
ttgctggaagaattacgctgccaggtatttatcacctgtgtagatcaagaatttttgagg
gaaggctggcagacggatacgccagtcgcattgttccacgtggaacaaggccgtatcacc
cagacccacgaccatcgggagtga
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