Pseudomonas syringae pv. tomato DC3000: PSPTO_0046
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Entry
PSPTO_0046 CDS
T00118
Name
(GenBank) conserved protein of unknown function
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PSPTO_0046
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GFIT
Motif
Pfam:
AAA_21
OLD-like_TOPRIM
AAA_15
DUF2813
SMC_N
AAA_23
AAA_27
ABC_tran
AAA_29
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AAO53601
UniProt:
Q88BG8
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Position
62078..64063
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AA seq
661 aa
AA seq
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MLIESAVLSGFRCFAPRPISVTISPKITTIVGPNAAGKTALLHALAKLFGVTRAQRTVRR
SDFHLGPDDDPTSLESKHLYIEVLIALPELIDGTATPETIAPSFRHMLIERPDDAPVCRL
RLDAQWEDDGTVEGEVSQTLHWVDTLDDAPPEDKCHPVSVADRGLIQLYYTPASRDAAAQ
TRATAGALAARLLRAIEWSSDTEEAVHDATENLASAFEEEAAIAAITEALQTRWSALHDD
VVDTNPRLSLVSRRFEEVVNKIAVMFEQGPDGQERGIEALSDGQQSLFYFALAAAVFDLE
REVVAGSIEGFRSDALRIPALTIFALEEPENHLSPYFLARIIRQVRSLTTDGSAQAIVTS
HSPAVLSRVNPTEVRYCRCDPKTRVSTVKRIKLPVNDVEASKFVRGAMLAYPELYFARFV
LLVEGDSERIVLPRLAEALNLLIDPAFVAIVPLGGRHVQHFWRLLKHLGIPHATLLDLDL
GRDGGGFGRVKTAIEKLIEFGAPKAEVLRITTGILSDADLANMHNWPDSVDHSGLLSWIN
NNLKAHGVYFSSPLDLDLAMLEAFPAAYAAIVPERGGSRMAADKAAEVVLGTAGPGLKAY
TGPFVGYPPQFPSYRYHFLTNSKPATHLAALTHITKAQLVAHMPVVLASVLKHISASLRR
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
gtgctaatcgaatctgccgtcctatctggtttccgttgctttgcgccccgtcctatcagc
gtaacaatctcgccaaagatcacgaccatcgtcggccccaacgcggcagggaaaactgcg
cttctacacgcgttggcgaagctgtttggagtgactcgggcacaacgcaccgtacgtcgc
tcggactttcacttgggacctgatgacgatcccaccagtcttgaatcaaagcacctctac
attgaggttttgatcgcccttcccgaactgattgatggaactgcaacgccagaaacgatc
gcaccttcatttcggcatatgctaatcgagcgaccagacgatgctcccgtctgtcgtctt
cggcttgacgctcagtgggaggacgatggaaccgtggaaggcgaggtttcgcaaaccctg
cactgggtcgacacgctcgacgatgcaccgccagaagacaagtgccaccccgtctccgta
gccgatcggggattaattcagttgtattacacaccggcaagcagagacgctgctgctcag
acccgggcgactgccggagcattggcggctcgtttgttacgcgcgatcgagtggtcgtcc
gataccgaagaggcggttcatgacgctaccgaaaatcttgcctctgccttcgaggaagaa
gcggcaattgccgcaatcacagaagctctacagacgcggtggtcggcacttcatgatgac
gtcgtcgacactaatccgcgcctgagtctggtaagtcgcaggttcgaggaggtcgtcaac
aaaattgcagtcatgttcgagcagggacctgacggtcaggagcgcggtatcgaggcgctc
agcgacggtcaacaatcgctcttttacttcgctctggctgcggccgtcttcgacctagag
cgtgaggttgtagcgggatcaattgagggcttccgaagtgacgctctgcggatacctgcg
ttgacgatcttcgctttggaggaaccagagaaccacctttcgccatatttccttgctcgc
atcatccgccaagtccgatcactcacaaccgatggcagcgcgcaagccattgtcaccagt
cactcacccgcagtacttagccgcgtcaatccgacggaagttcgatactgtagatgcgac
cccaaaacgcgcgtgtctacggtcaagcggattaagcttccagtcaacgacgtggaggct
agcaagtttgtaaggggtgcgatgttggcctacccagagctttattttgcgcggtttgtt
ttgctggttgagggagattcggaaagaattgttttaccgcgactcgcagaggcgctgaat
ttgctgatcgatccagcctttgtcgctattgtcccattgggtggacgtcatgttcagcat
ttttggcgcttgcttaaacatctgggtattcctcacgccacgctgttggatcttgaccta
gggcgcgatggaggcggttttggacgagtcaaaacggcgatcgaaaagctgatcgagttc
ggtgcaccgaaagccgaagtgctgagaattacaactggcatcttatccgatgccgactta
gcgaacatgcataattggcctgattcggtcgatcatagcggcctcctgtcatggatcaac
aacaacctaaaagctcatggagtgtatttctcctcaccgctggatttagatctagcaatg
ctggaagcattccctgccgcctatgcagccatcgtccccgagcgcgggggttctcgcatg
gccgctgacaaagccgccgaagtggtattgggaacggcaggtcccggattaaaagcctac
acagggccctttgttggttatccccctcaattcccgagttaccgctaccactttctcact
aacagtaagcctgcaacccaccttgcagcgttgactcatatcacaaaggcgcaactggta
gcgcacatgccagttgtgcttgcttcagtgctcaaacacatttccgcgtcgttgaggcgg
gactga
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