Pseudomonas syringae pv. tomato DC3000: PSPTO_0087
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Entry
PSPTO_0087 CDS
T00118
Name
(GenBank) bacterial extracellular solute-binding protein, family 5
KO
K12368
dipeptide transport system substrate-binding protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02010
ABC transporters
pst02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSPTO_0087
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PSPTO_0087
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_0087
Transporters [BR:
pst02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PSPTO_0087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AAO53641
UniProt:
Q88BD0
LinkDB
All DBs
Position
complement(108910..110496)
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AA seq
528 aa
AA seq
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MRLAALPFLLASTLLPLTAQASSLAVCTEASPEGFDVVQYNSLTTTNASADVLMNRLVDF
DAKSGKLVPSLAQSWTVSADGLTYDFKLRTGVKFHTTDYFTPTRELSADDVLFSFQRMLD
PQNPWHKIAQSGFPHAQSMQLPALIKSIEAPDAHSVRFTLNRADSTFLATLSMGFASIYS
AEYTAQLLKAGTPEKLNSQPIGTGPFVFKRFQKDAVVRYEAFKDYFAGKSDIDTLVYAIT
PDANVRLQKIRQDECQIALSPKPLDIQAASKDDSLKVEKTDAFMTAFVAINSQHPPFDKP
EVRQAINLAFDKANYLKAVFEGTAGAANGPYPPNTWSYAKDLPGYPHDVAKAKALLAKAG
LKDGFKTTVWTRPSGSLLNPNPSLSAQLLQADLKQIGIDAEIKVIEWGELIRRAKAGEHD
LLFMGWAGDNGDPDNFLTPQFSCAAVQSGTNFARYCDKTLDKLIADGKSTSDQAERSKLY
HQAQQQIQQQALWIPLAHPTAAALVRKDVSGYQVSPFGRQDFYKVQVK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgctgcacttccctttttgcttgcctccacgctactcccgcttaccgcacag
gcgtcgagccttgcggtctgcactgaagccagccccgagggtttcgatgtggtgcagtat
aactcgctgaccaccaccaacgcgtcggctgatgtgctgatgaaccgtctggtggacttc
gatgccaagagcggcaagctggtgccgagcctggcgcaaagctggaccgtctccgccgac
ggcctgacctatgatttcaagctgcgcaccggggtgaaattccacaccaccgactacttc
acgccgacccgcgaattgagcgcggatgacgtgctgttcagcttccagcgcatgctcgac
ccgcagaatccgtggcacaagattgcccagagcggcttcccgcatgcgcagtccatgcag
ttgcctgcgctgatcaaaagcatcgaagcgcctgacgctcattcggtccgcttcacgctc
aatcgagccgattcgactttccttgccacgctgagcatgggttttgcgtcgatctactcg
gcggagtacaccgcgcagctcctgaaagcgggcacgccggaaaaactcaacagccagcca
atcggcaccgggccgtttgtcttcaagcgcttccagaaagatgccgtggtgcgttacgaa
gcgttcaaggattacttcgccggcaagtcggatatcgacacgctggtgtatgccattacg
ccggacgccaatgtgcgcctgcagaaaattcgtcaggacgagtgccagatcgccctgtct
cccaagccgctggatattcaggcagccagcaaggacgactcgctgaaggtcgaaaaaacc
gacgcgttcatgactgcatttgttgcgatcaacagccagcacccgccgttcgacaagccc
gaagttcgtcaggcaatcaacctggctttcgacaaggccaattacctgaaagctgtattt
gaaggcaccgccggcgctgccaatggcccttatccgcccaatacctggagctacgccaaa
gacctgcctggctatccgcacgatgttgccaaagccaaggcattgctggccaaggccggt
ttgaaagacggcttcaagaccactgtctggacacggccttccggcagcctgttgaacccc
aaccccagtctgagcgcgcaattgctccaggctgatctgaagcagatcggtatcgacgcc
gagatcaaggtgatcgagtggggcgagctgattcggcgcgccaaggccggtgagcatgat
ctgctgttcatgggctgggcgggcgataatggcgatccggataacttcctgacgcctcag
ttctcgtgcgctgcggtgcaatcggggaccaactttgcgcgttattgcgacaagaccctg
gacaagctgatcgctgacggcaaatccaccagcgatcaggccgagcgcagcaagctgtat
caccaggctcagcagcagatccagcaacaggcgctgtggatccccctcgcccacccgaca
gccgctgcactggtgcgcaaggacgtttcgggctatcaggtcagccccttcggacggcag
gacttttacaaggtgcaggtgaagtaa
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