Pseudomonas syringae pv. tomato DC3000: PSPTO_0129
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Entry
PSPTO_0129 CDS
T00118
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthetase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00860
Porphyrin metabolism
pst01100
Metabolic pathways
pst01110
Biosynthesis of secondary metabolites
pst01120
Microbial metabolism in diverse environments
pst01240
Biosynthesis of cofactors
Module
pst_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
pst_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PSPTO_0129 (hemD)
Enzymes [BR:
pst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
PSPTO_0129 (hemD)
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Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
AAO53683
UniProt:
Q88B90
Structure
PDB
PDBj
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Position
153498..154274
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AA seq
258 aa
AA seq
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MSAWRLLLTRPAEESAALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVI
VVSKPAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLDHP
RLKQAIAVPGSRVLIMRGNEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEV
ERLNGLVVSSGQGFEHLLQLAGDSWPDLAGLPLFVPSPRVASLAQAAGARNVIDCRGASA
AALLAALRDQPQPAVKAY
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcctggcgtctgctgctgacccgtcccgccgaagaatcggcggcgctggcaagg
gtgctggcagatgccggaatcttcagcagcagtctgcctttacttgaaaccgagccttta
cccttgacgcctgcacagcgttcgatcattttcgagctgctcaattacagtgcagtcatc
gtggtcagcaaacctgctgcgcggctggccatcgaactgatcgatgaagtgtggccgcaa
ccgcctatgcagccgtggttcagtgtgggttcagcaaccgggcagatactccttgattac
ggactcgatgcgagctggccggagcagggcgatgacagcgaggccttgctcgaccatcca
cgccttaaacaggcgattgccgtacctggaagtcgcgtactgatcatgcgcggcaatgag
ggacgtgaactgctggccgagcaattacgcgaacggggggtgggtgtcgattacctgccg
ctgtaccgtcgctacctgccgcagcacgcccccggcaccctgttgcaacgcgtagaggtg
gaacgcttgaacgggctggtggtcagcagtgggcagggttttgaacatttgcttcagttg
gcaggtgattcatggccggatctggccggtctgccgctgtttgtaccgagcccccgggtt
gccagccttgcgcaggcagcgggcgcccggaacgttattgattgtcgtggcgccagcgca
gcggcattgctggcagcgttgcgggatcaaccccagcctgccgtcaaagcgtattga
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