Pseudomonas syringae pv. tomato DC3000: PSPTO_0157
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Entry
PSPTO_0157 CDS
T00118
Symbol
trpI
Name
(GenBank) trpBA operon transcriptional activator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pst03000
]
PSPTO_0157 (trpI)
Transcription factors [BR:
pst03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSPTO_0157 (trpI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_5
I-HmuI_NUMOD-like
P22_Cro
MarR_2
HTH_30
HTH_IclR
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AAO53711
UniProt:
Q88B62
LinkDB
All DBs
Position
complement(177812..178720)
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AA seq
302 aa
AA seq
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MSRDLPPLNALRAFESTARFGSVSQAAEQLSVTHGAVSRQLKVLEEHLGVSLFSKDGRGL
KLTDAGIRLRDASADAFDRLRSVCAELSKGSVDAPFVLGCSGSLLARWFIPRLSRLNAEL
PDLRLHLSAGEGDLDPRRPGLDALLVFAEPPWPADMQVFELASERIGPVLSPRFARFESM
RDAPANALLEESLLQTTSRPQAWPSWAQQNGIDPDALRYGQGFEHLYYLLEAAVAGLGIA
IAPEPLVIDDLKAGRLAAPWGFSETPAQLALWVPRRAADGRARQLAQWLKNELKRSGDPI
RN
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgacctccctcctctcaatgctttgcgtgcctttgaaagcaccgcccgattc
ggcagcgtcagtcaggccgccgagcagctgagcgtgacccacggtgctgtcagccgtcag
ttgaaagtcctggaagaacacttgggcgtcagcctgttcagcaaggacgggcgtggcctg
aaactcacagatgcgggcattcgcttgcgtgacgccagcgccgacgcattcgaccggctg
cgaagcgtgtgcgcagaactgagcaaaggcagcgtcgatgcgcctttcgtgctcggttgt
tccggcagcctgctggcccgttggtttatcccgcgcctgagccgcttgaatgcggagtta
ccggacctgcgtctgcacctgtcggcaggcgaaggtgatcttgacccacgtcggccaggg
ctggatgcgttgctggtatttgccgagccaccctggcctgcagacatgcaggtcttcgag
ctggccagcgaacgaatcggcccggtcctgagcccgcgctttgcgcgattcgaaagcatg
cgcgatgcgcccgccaacgccctgcttgaagaatccttgttgcaaaccacgtcacgtccg
caagcttggccaagctgggcacagcagaacggaatcgatccggacgcgttgcgctacggt
cagggtttcgagcatttgtattatttgctggaggcggccgtggcaggcttgggcatcgcg
attgcgccggaaccgctggtcatcgatgacctgaaagccggtcgcctggctgcgccgtgg
ggtttcagtgaaaccccggcacagctggcgttgtgggtacccagaagagcggccgatgga
cgagcgcggcagcttgctcagtggttgaaaaatgagctgaagcggtctggggacccgatc
agaaactga
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