Pseudomonas syringae pv. tomato DC3000: PSPTO_0176
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Entry
PSPTO_0176 CDS
T00118
Name
(GenBank) LysM domain protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
FlgT_C
Motif
Other DBs
NCBI-ProteinID:
AAO53730
UniProt:
Q88B44
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Position
complement(197323..198348)
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AA seq
341 aa
AA seq
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MRKSLLALLLLTASGLAQAQVQLREGYPQSYTVVAGDTLWDISGKFLREPWKWREIWRAN
PQVHDPDLIYPGDTLALTWVDGQPRVTLNRGESRGTIKLSPRVRSTPMVQAIPSIPLGAI
NAFLISNRIVDNAEQFDKAPYIVAGNAERVLSGNGDRAYARGKLDPTHTVYGIFRQGKIY
TDAQTKEVLGINADDIGSAEVVATEGDVSTLSLQRSTQEVRLGDRLFASEERSINSTFLP
SAPQTPIEGLILDVPRGVTQVAVMDVVTLNKGKRDGLTEGNVLAIYKTSETVRDRITGEQ
VKIPDERAGLLMVFRTYDKLSYALVLQANRSLAIMDKVRNP
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatcactactcgccctgctgctgttgaccgccagcggtcttgcccaggcgcaa
gtgcaactcagggaaggctatccgcagagctacaccgttgttgccggagacacactctgg
gacatttccggcaagtttttgcgtgaaccgtggaagtggcgcgagatctggcgggccaat
ccgcaggtccacgaccctgatcttatctaccccggtgacaccctggcattgacctgggtg
gacggccagccacgtgtgacgctcaaccgtggcgagtcgcgcggcaccatcaaattgtca
ccgcgtgtgcgcagtacaccgatggttcaggccattccaagtatcccgctgggtgcgatc
aatgcctttctgatcagcaaccgaatcgtcgacaatgccgagcagttcgacaaggcgccc
tatatcgttgccggcaatgccgagcgggtgctcagcggcaatggcgacagggcctatgcc
cgcggcaaactggacccgacgcacaccgtctatggcatcttccgccaaggcaagatctac
actgatgcgcagaccaaggaagtgctgggcatcaacgctgatgacatcggcagcgctgaa
gtggttgccaccgagggcgatgtctcgacccttagcctgcagcgttccacgcaggaagtg
cgtttgggcgaccggctgttcgccagcgaagaacgctcgatcaactcgacctttctgccc
agcgctccgcagacccccatagaaggtttgattctggatgtgccgcgcggtgtaacccaa
gtcgccgtcatggatgtggtcaccctcaacaaaggcaaacgtgacggtctgaccgaaggc
aacgtgctggcgatctacaaaaccagcgaaacggtacgtgaccgaatcaccggcgaacag
gtaaaaatccccgacgaacgggctggcctgctgatggttttccgcacttacgacaagctt
agttacgccttggtcctgcaagcgaaccgatctttggccatcatggacaaggttcgaaat
ccgtag
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