Pseudomonas syringae pv. tomato DC3000: PSPTO_0252
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Entry
PSPTO_0252 CDS
T00118
Name
(GenBank) peptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPTO_0252
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_0252
Transporters [BR:
pst02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PSPTO_0252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
AAA_16
AAA_22
nSTAND3
AAA
AAA_25
nSTAND_NTPase5
nSTAND1
Zeta_toxin
ATP-synt_ab
NACHT
AAA_18
APS_kinase
Sigma54_activat
IstB_IS21
CbiA
PhoH
DUF87
Motif
Other DBs
NCBI-ProteinID:
AAO53798
UniProt:
Q88AY1
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Position
273152..274993
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AA seq
613 aa
AA seq
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MSQLIRVQDLRVVAEGDHGELEIVKGVSFALEKGEVLALIGESGSGKTTIALALLGYARR
GCKLAGGVVRVGEHDMLSLPESQLQGLRGNRVSYVAQSAAAAFNPAKKLIDQVIEGALIH
GLGSRADLQAKAIELFRDLALPNPETIGQRYPHQVSGGQLQRVMAAMALISDPLLVILDE
PTTALDVTTQIDVLRAFKRVVRERGATAVYVSHDLAVVAQMADQIVVLNGGRIIEQSSTA
ALLKGPEDPYTRSLLAAARPDKVLKPASEVVKDSTLLTIKGLTAGYGKKNLQGMPMIRVL
EDIDLTIRRGQAIGVIGESGSGKSTLARVVAGLLDPAHGSLTFDGAELSGTLAGRTEEQF
RRIQMVFQNADTALNPMHSVGAILARPLKMYFGLKGKALRERIDELMDLVRLPRELAERR
PNELSGGQKQRVNLARALAAKPDLILCDEVTSALDTVVGACILELLGELRRKLGVSYLFI
SHDISTVRALCDDIVVMYSGHKVEEGSRETFSHVPFHPYTDLLVHSVPELRQGWLESCGV
TSGKLPPISAPVNNRELCTFLNRCPARIEGLCNRTAPGRRRIAGGSEILCHRDSDELQAV
QENLNPVTVGAYA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttgattcgcgtacaagacctgcgcgtggttgccgagggcgatcacggtgaa
ctggaaatcgtcaaaggcgtcagcttcgcactggaaaaaggtgaagtgctggcgttgatc
ggcgagtccggctcgggcaagacgactattgcgctggcactgctgggttatgcccggcgc
ggctgcaaactggcaggcggcgtggttcgggtcggcgagcatgacatgctcagcctgccc
gaaagccagttgcagggcctgcgtggcaatcgcgtttcgtacgtcgcgcaaagtgccgcc
gcggcgttcaacccggcgaaaaagctcatcgatcaagtgatcgagggcgcgctgattcac
ggtctgggcagtcgtgcagacttgcaggccaaagccatcgagctgttccgcgatctggcc
ttgcccaacccggaaaccattggccagcgttatccgcaccaggtgtcgggcgggcagttg
caacgggtgatggcggcgatggcgctgatcagcgacccgttgctggtgatcctcgacgaa
ccgaccaccgcactggacgtcaccacgcagatcgacgtgctgcgcgccttcaagcgtgta
gtgcgcgagcgcggcgcgacggcggtctatgtctcccacgaccttgcagtggtggcgcag
atggctgatcagatcgtggtgctcaacggcgggcggatcatcgaacagagcagtacggcg
gcattgctcaaaggcccggaagacccgtacacccgcagcctgctggcagcggcgcggccg
gataaagtgctgaaaccggccagcgaggtggtcaaggacagcaccctgttgaccatcaaa
gggctgaccgccggctacggcaaaaagaacctgcaaggcatgccgatgattcgcgtgctg
gaagacatcgacctgaccatccgccgtggccaggccatcggcgtgattggcgagtcgggc
tcgggcaaatcgaccctggcccgtgtggtagccggtctgctggatccggcccacggcagc
ctgacgtttgacggcgctgaactgtcaggcaccttggcggggcgcaccgaagagcagttc
cggcgcatccagatggtgtttcagaacgccgacaccgcgctcaacccgatgcacagcgtc
ggtgcgattctcgcccggccgctgaaaatgtatttcggtctcaagggcaaggcgttgcgc
gagcgtatcgacgagttgatggacctggtgcgtctgccacgcgagctggccgagcggcgc
cccaatgaactgtcgggcgggcagaagcaacgcgttaacctggcccgtgcactggccgcc
aaaccagaccttattctttgcgatgaagtcacctcggcgctcgataccgtggtcggtgcc
tgcatcctcgaactgctcggcgaactgcgccgcaagctgggtgtttcctacctgttcatc
agccatgacatttccaccgtccgcgcgctgtgcgacgacattgtggtgatgtacagcggc
cacaaggtcgaagagggcagccgtgaaaccttcagccacgtaccgttccatccgtatacc
gatctgttggtgcactcggtgccggaactgcgtcagggctggctggaaagctgcggcgtg
accagtggcaaactgccgccgatcagcgccccggtcaacaaccgggagctgtgcactttt
ctcaatcgctgcccggcgcggatcgaaggcctgtgcaacaggaccgcgcctggccgtcgt
cgcattgcaggcggcagcgaaattctttgccatcgcgacagcgacgaactgcaagccgta
caagaaaaccttaatcctgtgaccgtgggagcctacgcatga
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