Pseudomonas syringae pv. tomato DC3000: PSPTO_0327
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Entry
PSPTO_0327 CDS
T00118
Name
(GenBank) S1 RNA binding domain protein
KO
K06959
protein Tex
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PSPTO_0327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AAO53872
UniProt:
Q88AQ9
LinkDB
All DBs
Position
complement(356256..358577)
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AA seq
773 aa
AA seq
DB search
MDSINSRIAEELGVRPQQVAAAVALLDEGSTVPFISRYRKEVTGSLDDTQLRHLEERLRY
LRELDDRRVSILASIEEQGKLTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPSLTPDAEAARFVDAEKGVADVKAALEGAKYILMERFAEDASLLDKLRS
FLKQEAVISARVVPGKEEEGSKFRDYFEHDEPLKSMPSHRALAIFRGRNEGFLSSALKVG
EELPGAMHPCELMIGERFGIQNQSRAADKWLAEVVRWTWKVKLYSHLETDLLGELREGAE
TEAINVFAHNLHDLLLAAPAGQRATLGLDPGLRTGCKVAVVDATGKLLDYATVYPHVPKN
QWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLIKKYPGLKMTKVMVSEAGASV
YSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNTTLAQNIVAHRDENGAFKTRAALKKVSRL
GEKTFEQAAGFLRVMTGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDASFLKRLDP
KKFTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQEGVEDLKDLQPGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEIDIPRKRVGLSMRMS
DTPGEKIDGARGARPGASPRQQNSAPRKETTAPAPANNAMASLFANAKQLKKR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaagaactcggcgtacgcccacaacaggtcgca
gcggccgtagcactactggatgaaggctcgaccgtgcccttcatttcccgctaccgcaag
gaagtgaccggcagtctcgatgacacgcaattacgccatctggaagaacgtctgcgctat
ctgcgcgaactggacgaccggcgcgtcagcattcttgccagcatcgaagagcaaggcaag
ctgaccccggaactggctcgcgacatcaagctggccgacaccaagacccgccttgaagat
ttgtacctgccttataagcagaaacgccgtaccaagggccagatcgcccttgaagcgggc
ctcggcgagctggctgatggcctgttcaacgacccgagcctgaccccggacgccgaggcc
gcccgttttgtcgacgccgagaaaggcgtggccgacgtgaaagctgcgctggaaggcgcc
aagtacatcctgatggagcgcttcgccgaagacgcctcgctgctggacaaactgcgcagc
tttctcaagcaggaagcggtgatcagcgcgcgcgtggtgccgggcaaggaagaggaaggc
tccaagttccgtgactacttcgaacacgacgagccgctcaaaagcatgccgtcgcatcgc
gcgctggcaattttccgtggccgcaacgaaggttttctcagctcagcactgaaagtcggt
gaagaactgccaggtgccatgcacccgtgcgaactgatgatcggcgagcgtttcggcatc
cagaaccagagccgtgcggcggacaaatggctggccgaagtggtgcgctggacctggaag
gtcaagctgtatagccatctggaaaccgatctgctgggtgagttgcgtgaaggcgctgaa
accgaagccatcaacgtgttcgcccacaacctgcacgacctgctgctcgccgccccggct
ggccagcgcgccacgcttggcctggacccgggcctgcgcaccggctgcaaggtcgcggtc
gtggatgccaccggcaaactgctcgactacgcgactgtttatccgcatgtgccgaaaaat
cagtgggatcagaccatcgccgtgctggccgccctgtgcgccaagcattcggtcgacttg
atcgccatcggcaatggcaccgccagccgcgaaaccgacaagctggccgccgacctgatc
aaaaaatacccaggcctgaaaatgaccaaggtcatggtttccgaagctggcgcatcggtg
tactcggcgtcggaactggccgccaaggaattcccggacctcgacgtgtcgatccgtggc
gcagtatcgattgcccgccgtttgcaggacccactggccgaactggtgaaaatcgacccg
aaatccattggtgtcggccagtatcagcacgacgtgtcgcagctcaaactggctcgcggc
ctggacgcggtggttgaagactgcgtgaacgcagtgggcgtggacgtaaacaccgcgtcg
gtggcgctgctggcgcgaatttccggcctcaacaccacgctggcgcagaatatcgtcgcg
catcgcgatgaaaacggtgcgttcaagacccgcgcagcgctgaagaaagtcagccgtctg
ggcgagaagacctttgagcaggccgcaggcttcctgcgcgtcatgaccggtgacaacccg
ctggactcttctgccgttcacccggaagcctacccgctggtgcagcgtattgcggctgaa
accgaccgcgacatccgttcgctgatcggcgacgccagctttctcaagcgtctggacccg
aagaagttcaccgacgagacctttggtctgccaaccgtcaccgacattctccaggaactc
gaaaaaccgggccgcgacccgcgtccggagttcaagaccgctgaatttcaggaaggcgtc
gaggacctcaaggacctgcaaccgggcatgatcctcgaaggtgttgttaccaacgttacc
aacttcggtgctttcgtcgacatcggcgtgcatcaggacggtctggtgcacatctcggcg
ctgtccgagaagttcatcaaggacccgcgcgaagcggtcaaggccggtgatgtggtgaaa
gtgaaggtcatggaaatcgacatcccgcgcaaacgcgtcggcctgtcgatgcgcatgagc
gacacgcccggcgagaaaatcgacggtgcgcgcggcgcacgccctggtgcctcgcctcgc
cagcagaacagcgccccgcgcaaggaaaccactgctccggcaccggccaacaacgccatg
gcctcgctgttcgccaacgccaagcaattgaagaagcgctga
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