Pseudomonas syringae pv. tomato DC3000: PSPTO_0344
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Entry
PSPTO_0344 CDS
T00118
Symbol
polI
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03030
DNA replication
pst03410
Base excision repair
pst03420
Nucleotide excision repair
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSPTO_0344 (polI)
03410 Base excision repair
PSPTO_0344 (polI)
03420 Nucleotide excision repair
PSPTO_0344 (polI)
03440 Homologous recombination
PSPTO_0344 (polI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pst03032
]
PSPTO_0344 (polI)
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_0344 (polI)
Enzymes [BR:
pst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSPTO_0344 (polI)
DNA replication proteins [BR:
pst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSPTO_0344 (polI)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSPTO_0344 (polI)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSPTO_0344 (polI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
AAO53889
UniProt:
Q88AP3
LinkDB
All DBs
Position
complement(373243..376020)
Genome browser
AA seq
925 aa
AA seq
DB search
MILLMTQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRRQYPDSPLA
VVFDAKGGTFRDALYTDYKANRPSMPDDLRVQVDLLHACVKGMGYPFLCVEGVEADDVIG
TLARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDY
LALMGDKVDNIPGVPGVGEKTAVGLLVGVGGGIKELYDNLEMVATLPIRGAKTLAAKLEE
HRAMAFLSYELATIKIDVPLDIELEQLHCSEPDRDKLMELYAELEFKSWIEDLQRDAKRA
GQELVVEEPTVAAKEAAYEVILEQGQFDAWLKKLQAAPLFAFVTQSNGTDAQRAQLVGLS
FAIQPHEAAYIPLTHSYMGVPQQLDRDTVLKTLKPLLEDPNKIKVGQHAKFAINLLANCA
IGGDQAQGIELQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPINFQDIAGKGAKQL
TFDQIAIEQAGNYAAEEADLTLRLHEVFEARLAAIPTLQPVLNEIEMPLVPVLARIERQG
ALVDANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEKLGMPILSKTAT
GQPSTAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAV
AVTGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGL
LHAFRNDLDVHRATASEVFGVELENVTTDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQ
SQAYVDRYFARYPGVLDYMERTRTQAAEQGFVETIFGRRLYLPDINAKNPSLRNGAQRMA
INAPMQGTAADIIKKAMVAVNGWLDESGLDARVILQVHDELVLEVREDLVDQISEQIRPH
MSGAAELAVPLLVEVGVGNNWDEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
ttgattctgctcatgacccaagcgccgctcgtcctggtggacggttcttcttacctctac
cgcgccttccacgccctgccacccctgaccacgtccaaagggttgccgaccggcgccgtc
aagggcgtgctcaacatgctcaaaagcctgcgccgtcaatacccggacagcccgctcgcg
gtcgtcttcgatgccaagggcgggacgttcagggacgcgctgtacaccgactacaaggcc
aaccggccgagtatgccggatgacctgcgcgtgcaggtcgatctgctgcacgcttgcgtg
aaaggcatgggctatccgtttttgtgcgttgaaggcgtcgaagcggatgatgtgatcggc
accctggcgcgcagcagcgcggcggctgatcgtccggtggtcatttccaccggcgacaag
gacatggcgcagctggtcgatggccatatcacgctggtcaacaccatgaccggcagcgtg
ctggacgtggcgggcgtaaaagaaaaattcggcgtcggcccggagcacatcatcgactac
ctcgctctgatgggcgacaaggtcgataacatccccggcgtgcccggcgttggcgaaaaa
accgctgtcggcctgctggtgggcgtgggtggcgggatcaaggagctttacgacaacctg
gaaatggtcgcgaccctgccgatccgcggcgccaagaccctggccgccaagcttgaagaa
caccgcgcgatggccttcctctcttacgagttggcgaccatcaagatcgacgtgccgctg
gacatcgagctggagcagttgcattgcagcgagccagaccgcgacaagctgatggaactg
tacgccgagctggaattcaagagctggatcgaagacctgcaacgcgatgccaaacgcgca
ggccaggagctggtggtcgaagagccgaccgtggcagccaaggaagcagcgtacgaggtc
attcttgagcaagggcagttcgacgcctggctgaaaaagcttcaggcggcaccgcttttc
gccttcgttacccagagcaacggcaccgacgcccagcgtgcgcaactggtgggcctgtct
ttcgccatccagccccacgaagccgcctacatcccgctgacccactcctatatgggcgtg
ccgcagcaactggatcgcgacaccgtcctcaagacgctcaagccgctactggaagacccg
aacaagatcaaggtcggtcagcacgccaaatttgccatcaacctgctcgccaactgcgcg
atcggcggtgatcaggcgcagggcatcgagctgcagggtgtgcgctttgacaccattctt
gaatcctacgtactggactccaccgccactcgccacgaccgcgacagcctggtggccaag
tacctgacgcatacgccgatcaacttccaggacatcgccggcaagggtgccaagcagctg
accttcgaccagatcgccatcgagcaggccggtaactacgccgccgaagaggccgacctg
accctgcgcctgcatgaagtcttcgaagcccgcctggccgcgattccgaccttgcagccg
gtgctcaacgagatcgagatgccattggtgccggtgctggcccgcatcgaacgtcagggc
gcgctggtcgatgccaacctgctgggcatccagagcgttgagctgggcgacaagatgacc
gcactggagcgcgaggcgttcgccattgccggtgaagaattcaacctcggttcgcccaag
cagcttggcgtgattctctacgaaaaactcggcatgccgatcctgagcaagaccgccacc
ggccagccatcgacagccgaggcggtgcttgccgagctcgccgaacaggacttcccgctg
cccaaggtgctgatgcagtaccgctcgatgagcaagctcaagagcacctataccgaccgc
ctgcccgagcagatcaacccgcgcaccgggcgtattcacacctcctatcatcaggcggta
gccgtgaccgggcgtttgtcttccagcgacccgaatctgcagaacatccctattcgtacc
gccgaaggccgccgcatccgtcaggcgttcgtggcgcccaagggttacaagctgctggcg
gcagactattcgcagattgaactgcggatcatggcgcacctggccaaggacgaaggcttg
ctgcatgcgttccgcaacgacctggacgtccaccgcgcgacagcgtcggaagttttcggc
gtcgaactggagaacgtcaccaccgacatgcgccgcagcgccaaagcgatcaacttcggc
ctgatctacggcatgagcgcatttggcctggccaaacagatcggcgtggaccgcaagcag
tcgcaggcgtatgtcgatcgctattttgcccgctaccccggcgtgctggactatatggag
cgcacgcgcacccaggccgccgagcagggcttcgtcgagactattttcggccgtcgcctg
tacctgccggacatcaacgccaagaacccttcactgcgcaacggcgcgcaacgcatggcg
atcaacgcgccgatgcagggcacggcggcggacatcatcaaaaaagcgatggtggcggtg
aatggctggctggacgaatccggcctggatgcacgggtcatcctgcaggtgcacgatgaa
ctggtactggaagtgcgcgaagacctggttgatcagatcagcgagcagatccgtccacac
atgagcggagcggcagaactggcagtgccgctgctggtggaagtcggggtcggcaacaac
tgggacgaggcacattaa
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