Pseudomonas syringae pv. tomato DC3000: PSPTO_0397
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Entry
PSPTO_0397 CDS
T00118
Name
(GenBank) iron-sulfur cluster-binding protein
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00260
Glycine, serine and threonine metabolism
pst01100
Metabolic pathways
Module
pst_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSPTO_0397
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_8
Fer4_17
Fer4_10
Fer4_9
Fer4_7
Fer4_6
Fer4_2
Fer4_16
Fer4
Fer4_4
Fer4_21
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
AAO53941
UniProt:
Q88AJ3
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All DBs
Position
437235..439244
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AA seq
669 aa
AA seq
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MQLKARTLKLAPEVNVMLDTLLPILLFSALALAALGAWRRVNMWRMGRASRVDLLGGLLA
MPKRYMVDLHHVVARDKYIANTHVATAGGAVASVVLAILVHGFGLHNRVLGYALLLMTAV
MFVGAVFVYRRRLNPPARLSKGPWMRLPKSLMAFSASFFLVTLPVAGILPEHFGGWVLVA
ILGLGVLWGVSELFFGMTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLNDRTA
PLGVEKPADFTWNQLLGFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAK
FAGSPYPSLDGKGKPLGEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAI
VDMRRYLTLEKGATPNKGAQVLDNLIATDNPGGFAPGGRMNWAADLNLDLLSVRKTVDVL
FWVGDGAFDMRNQRTLRAFVKVLKAARVDFAVLGLEERDSGDVARRLGDEATFQTLARRN
IQTLAQYHFKRIVTCDPHSFHVLKNEYGALGGDYQVQHHSTFMAELVQRGTLNLSQHKGA
SVTYHDPCYLGRYNGEYEAPREVLRALGIEVREMQRSGFRSRCCGGGGGAPITDIPGKQR
IPDMRMDDIRQTAAEVVAVGCPQCTAMLEGVVEPRPLIKDIAELVADALVEEVIPSPSVA
AKREPAEVH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcttaaagcccgcaccttaaagctcgcacctgaggtcaacgtgatgctagacacc
cttctccccatcctgctgttcagcgccctggccctcgcggcgctgggtgcctggcggcgg
gtgaatatgtggcgcatgggccgtgcttccagagtcgatctgctcggcgggctgttggcc
atgcccaagcgctacatggtcgatctgcaccacgtggttgcccgtgacaaatacatcgcc
aacacgcatgtggcgacggcaggcggcgcggtcgcctcggttgtgctggcgattctggtg
catggtttcggtctgcataaccgtgtgctgggctacgcgctattgctgatgaccgcagtg
atgttcgtcggcgcagtgtttgtctatcgccgtcgcctcaacccgcctgcgcgtttgtcc
aaaggaccgtggatgcgcctgccgaaaagcctgatggcgttttccgcgagcttctttctg
gtcacgttgccggtggccggtattcttcccgaacacttcggtggctgggtgctggtcgcc
attctcgggttgggtgtgttgtggggcgtgagcgagctgttcttcggcatgacctggggc
ggcccgatgaagcacgctttcgccggggccttgcacctggcctggcatcgccgtgccgag
cgttttggcggtggacgttccaccgggttgaaaccgcttgatctgaatgatcggactgca
ccgctgggtgtcgagaagcccgcagacttcacctggaaccagttgctgggtttcgacgcc
tgcgtgcagtgcggcaaatgtgaagcagcgtgcccggcgttcgcggcgggtcagccgctg
aaccccaagaagctgatccaggacatggtcgtcggccttgccggcggcaccgacgcaaaa
tttgccggcagcccgtacccatcgcttgatggcaaaggcaagccactgggcgagcatggc
ggcaacccgcatcagcccatcgtcaacggtctggtggatgccgagacgctgtggtcctgc
accacctgccgcgcgtgtgtcgaagagtgcccgatgatgatcgagcacgttgatgccatc
gtcgacatgcgccgctacctgaccctggaaaaaggcgcaacgccgaacaaaggcgcgcaa
gtgctggataacctgatcgccaccgacaaccccggcggcttcgcaccgggcggacgaatg
aactgggccgccgacctgaaccttgatctgctcagcgtgaggaagacagtagacgtgctg
ttctgggttggcgatggcgcgtttgacatgcgcaatcaacgcacgctgcgtgcgttcgtc
aaagtcctcaaggcggccagggtggatttcgccgtgctgggccttgaagagcgcgacagc
ggtgacgtggctcggcgtctgggcgatgaggcgacttttcagacgctcgcccgccgcaac
attcagaccctggcccagtaccacttcaaacgcatcgtgacctgcgacccgcacagcttt
catgtgctgaaaaacgaatacggcgcattgggcggtgactatcaggtgcagcatcacagc
accttcatggccgaactggtacagcgcggcaccctgaatctgagccagcacaaaggcgcc
agcgtcacctatcacgacccgtgttacctgggccgctacaacggcgaatacgaagcaccg
cgtgaagtgctgcgcgcgctgggtatcgaagtcagggagatgcagcgctccggctttcgt
tctcgctgctgcggtggtgggggcggcgcaccgattacggacatccccggcaaacagcgg
attcccgacatgcgtatggacgacattcgtcaaaccgctgccgaggtggtggcggtgggt
tgtccacaatgcacggccatgcttgaaggtgtggttgaaccgcgcccgctgatcaaggat
atcgccgagctggtggctgatgcgctggttgaagaagttatccccagcccgtctgttgcc
gccaaacgtgaacccgcggaggtgcactga
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