Pseudomonas syringae pv. tomato DC3000: PSPTO_0470
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Entry
PSPTO_0470 CDS
T00118
Name
(GenBank) exonuclease, putative
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03030
DNA replication
pst03430
Mismatch repair
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSPTO_0470
03430 Mismatch repair
PSPTO_0470
03440 Homologous recombination
PSPTO_0470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pst03032
]
PSPTO_0470
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_0470
Enzymes [BR:
pst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSPTO_0470
DNA replication proteins [BR:
pst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSPTO_0470
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSPTO_0470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AAO54014
UniProt:
Q88AC2
LinkDB
All DBs
Position
complement(514680..515393)
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AA seq
237 aa
AA seq
DB search
MNLFEWLKPRPKKVPLDAHQLKRIKQLPVCAKLSDKPLRQQRWVVLDLETSGLNMNRDQV
LSIGAVVIEDGAIDLGQQFERTLLRVDHKLSPAVLIHGLAPSAIAAGSEPVEALLDFMEF
VGDSPILGFHAPFDQHMLARALKESLDYRLQHAFFDAAEIAPMLCEQANLRHAGLDDWTQ
FFGLHAEERHNASADALVTAELALILFSHARRQQIDSTLRLAESLGQWRRRKQSHSF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgttcgagtggttgaagccacgtccgaaaaaggtccctttggacgctcatcaa
ctgaagcggatcaagcaattgccggtctgcgcgaagctcagcgacaaaccgctgcgccaa
cagcgctgggtggtgctggacctggaaaccagcgggctgaacatgaaccgcgatcaggtg
ctgtccatcggagcggttgtgattgaggacggagccatcgatctgggccagcagttcgag
cgcacgctgttgcgcgtcgatcacaagctcagcccggccgtgctgattcatgggctggca
cccagtgcgattgcagcgggcagcgagccggtcgaggcgttgctggatttcatggagttt
gtcggcgacagcccgattctgggctttcatgcaccattcgatcagcacatgctggcgcgt
gcgctgaaagaaagcctggactaccgtttgcagcatgcgtttttcgacgccgccgaaata
gccccgatgctctgcgaacaggccaacctgcggcacgccgggctggacgactggacgcag
ttttttggcctgcacgccgaagaacgccacaacgccagcgccgatgcactggtcaccgca
gagctggcgttgattctgttcagccacgcccgccgccagcagatcgacagcaccttgcga
ctggcagaatcactggggcagtggcgcaggcgcaagcagtcgcattcgttctga
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