Pseudomonas syringae pv. tomato DC3000: PSPTO_0488
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Entry
PSPTO_0488 CDS
T00118
Name
(GenBank) ABC transporter, permease protein
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPTO_0488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_0488
Transporters [BR:
pst02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSPTO_0488
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
DUF6185
Motif
Other DBs
NCBI-ProteinID:
AAO54032
UniProt:
Q88AA4
LinkDB
All DBs
Position
534434..535228
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AA seq
264 aa
AA seq
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MKRSPLFAAQLAFTLLVCAFMLVPVVLSLLAGVTRNYFLGLSSGLTFDWLVQVWQGYSPT
VWLSLQLAVACAICVCLVGVPAAYALVRMNNRFSRAFEELMVLPVAMPGLASALALLLTY
GQFGSFRSSWLFILVGHVLFTLPFLVRPVMAVMQRQQLPVLEEAAASLGAGPIKRFFSVV
VPNCRAGILAGVLMVVTLSLGEFNLTWMLHTPMTKTLPVGLADSYASARLEVASAYTLLF
LLLIVPLLIALQAISARLARGESR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgctctccgttgtttgctgcgcaattggcgttcacgctgttggtctgcgcgttc
atgctggtgccggtggtgctgtcgctgctggccggcgtgacccgcaattattttctgggc
ctgtcgagcggtttgaccttcgactggctggtacaggtctggcagggctattcgccgacc
gtctggctgtcgctgcaattggcggtggcctgcgcgatctgcgtgtgcctggtcggcgtt
ccggcggcgtatgcgctggtacgcatgaacaatcgcttcagccgtgcatttgaagagctg
atggtgctgccggtcgccatgcctggccttgccagcgcgctggcgttattgctgacctac
ggccagttcggcagctttcgcagcagttggctgttcattctggtgggccacgtgctgttc
acgttgccgtttctggtgcgcccggtgatggcggtcatgcagcgtcagcagttgccggtg
ctcgaggaggccgcggccagtcttggggccgggccgatcaagcgttttttcagcgtggtg
gtgccgaactgccgggccgggattctggccggtgtgttgatggttgtgaccctgtcgctg
ggtgaattcaacctgacctggatgctccacacgccgatgaccaagaccctgccggtcggc
ctggccgacagttatgcctcggcccggctggaagtcgccagcgcctacacccttcttttt
ctgttgctgattgtgccgctgctgattgcgttgcaggccatcagcgcgcgtcttgcccgt
ggagagagccgatga
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