Pseudomonas syringae pv. tomato DC3000: PSPTO_0489
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Entry
PSPTO_0489 CDS
T00118
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPTO_0489
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_0489
Transporters [BR:
pst02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSPTO_0489
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA_22
SMC_N
Rad17
AAA
AAA_16
SbcC_Walker_B
AAA_14
AAA_28
ATP-synt_ab
NACHT
nSTAND_NTPase5
ATPase_2
AAA_29
AAA_23
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AAO54033
UniProt:
Q88AA3
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All DBs
Position
535225..536268
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AA seq
347 aa
AA seq
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MSGTTIRLKGCRKAFADGTVAVQDLHLTIEPGETLAILGPSGCGKTTTLRLIAGLERPDV
GQVLFDDQDVTRLPIERRDVGMVFQNYALFPNLDVAGNIVYGLKIRGLSAAECNKRCDEL
LELVGLTGHGNRRVNELSGGQRQRVALARALAPRPRVLLLDEPLAALDAQLRERLRSELD
QLLRGLGITSVFVTHDQGEAMALGDRILVMEKGCVSQLATPREIYQRPANAFVAGFVGNL
NAFSVVARTSSGLTVSGGELPWNGADMPGTVYCRPEHLRLVPGHGHLQSHLQGRLVGQFF
QGAQSRLLVDVGGPQPLLVDSTDNVIYPANAAIGLSVEPQQLFTLHS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaccaccattcgcctgaaaggctgccgcaaggcatttgccgacggcaccgtt
gctgtacaggatttgcacctgaccatcgaacccggcgaaacgctggcgattctcgggccg
tccggttgtggcaagaccaccacgttgcgcctgattgccgggcttgagcggccggacgtc
gggcaggtgctgttcgacgatcaggacgtcacgcgcctgcccatcgagcggcgtgacgtg
ggcatggtgtttcagaactatgcgttgtttcccaatctcgatgtggccgggaatatcgtc
tacggtctgaagattcgcggcctgtcggctgccgagtgcaacaagcgttgtgacgagttg
ctggaactggtcggcctgaccggtcacggcaatcgtcgcgtcaacgagctgtctgggggg
caacgtcaacgggttgcgctggcccgtgcactggcgccgcgccctcgggtgctgttgctc
gacgagccgttggccgcactggacgcgcagttgcgcgagcgcttgcgcagcgagctggat
cagctcctgcgcgggctgggcatcacctcggttttcgtgactcatgatcagggcgaagcg
atggccttgggcgaccggattctggtgatggaaaaaggctgcgtgtcgcagttggcgacg
ccacgggaaatctatcagcggcccgccaatgcttttgtcgcagggtttgtcggcaatctg
aatgcgttcagtgtggttgcgcgcacctcgtcgggcctcacggtcagcggcggcgagttg
ccgtggaatggcgcagacatgccgggcacggtgtattgccgtcctgagcacctgcgtttg
gtgccggggcatggccatcttcagagccatcttcagggtcgtctggtcgggcagtttttt
cagggcgcgcaaagccgcttgctggtcgatgtcggcggcccgcagccgctgttggtcgac
agcaccgacaacgtgatttaccccgccaacgccgccattggcctgagtgtcgagccgcaa
caactgttcaccctgcattcgtga
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