Pseudomonas syringae pv. tomato DC3000: PSPTO_0559
Help
Entry
PSPTO_0559 CDS
T00118
Name
(GenBank) sensory box histidine kinase
Organism
pst
Pseudomonas syringae pv. tomato DC3000
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HisKA_3
SBP_bac_3
HATPase_c
PAS_9
PAS_4
PAS
HATPase_c_2
PAS_8
Diguanyl_cycl_sensor
Sema4F_C
PaRep2b
DUF6272
Motif
Other DBs
NCBI-ProteinID:
AAO54101
UniProt:
Q88A38
LinkDB
All DBs
Position
614343..616358
Genome browser
AA seq
671 aa
AA seq
DB search
MIIRLLRTGFIGCMALLLMVHMANTQADEPQSPALAQLSPAQRGWLDQHGPLRVGLVLRA
PYAQFDQRLQQLSGANVDLMNALAATLPVELLWRNFVDQASLEKALSNGEIDVAPGLMQT
PAGLRLWLFSDPYLRVSQLLIGERDGSTAVDLEKLDSLSRVAVRMPSATADYLRSNFPHL
NLQGVPLERQALQLLLSQQARYAVVDEAQLSRLLREPEFAGLAVVGDTGLPQLLRVASRR
DAPELAAIVSEALRAVPAKELEQLHARWMPLTPSHFSESTKLWKNLCILLLVMLLACFAI
VIWQRRQQQALEQELLAGREHLARRVASEEALRLAQFSIDQSTVGILWVNWDSRVRYANR
AVESMLGYAPGQVVERPLIDFEPDLHMDRWLNLWKNARSSEDSAQVFETHCLRADGSLLP
ADVSLSFLRFRDAEYLVVFLSDVSERRRAHDQLRELSAHLESVREEEKARIAREVHDELG
QMLTVLKLETSMCELAYADLDPGLSERLDSMKRLISQLFQLVRDVATALRPPILDAGIAS
AIEWQARRFEARTQIPCLVQVPDNLPALSDARATGMFRILQEALTNVMRHAQAHTVEISL
TLQDGMMCMTVADDGQGFVVESGRAVSFGLVGMRERVLMLGGRLELDSEAGEGTTLRAYI
PLDPTAQERSQ
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtgatcattcgtcttctgcgcaccggttttatcggctgcatggctttgctcttgatggtt
cacatggcgaatacacaggccgatgagccgcaatcgcctgcgcttgcgcaactgagcccg
gcacagcgtggctggctcgatcagcatgggccgttgcgggttggtctggtgctgcgtgcg
ccttacgcccagtttgatcagcgtttgcagcaactgtccggcgctaacgtcgacctgatg
aacgcgctggcggcaacgctgcctgtcgagttgctgtggcgaaactttgtcgatcaggcc
tcactggaaaaagccctgagcaacggagaaatcgacgtcgcccccggcttgatgcagacc
ccggcgggtttgcgtctgtggttgttttccgatccgtatctgcgcgtatcgcaactgttg
atcggtgaacgtgacggcagcaccgccgtggacctggaaaaactcgacagcctttccagg
gtcgcggtgcgtatgccaagcgctactgccgattacctgcgcagcaattttccgcacctg
aacctgcaaggggtgccgctggagcgtcaggcgctgcaattgctgctcagccagcaggca
cgctatgccgtggtggatgaagcacaactcagtcgcttgctgcgtgagccggagtttgcc
gggctggcggtggtcggcgataccggcctgccacaactgttgcgtgtggcgtcacgccgc
gacgcgccagagctggcggcgatcgtcagcgaagccttgcgggcggttcctgccaaggag
ctggagcaactgcatgcgcgctggatgccgctgaccccgtcgcacttcagtgaatcgacg
aagctctggaaaaacctgtgcattttactgttggtgatgctgctggcctgtttcgccatc
gtgatctggcagcgccgtcagcagcaggcgctggagcaggaactgctggccgggcgtgaa
catctggcccgtcgcgttgcaagcgaagaggcgctgcgactggcacaattctccattgat
cagagcaccgtcggtattctctgggtcaattgggacagtcgcgtgcgctatgccaaccgg
gcggtggaatccatgttgggctatgcgccggggcaagtggtcgagcgtccgctgatcgac
ttcgagcccgacctgcacatggaccgctggcttaatctgtggaagaacgcacgctccagt
gaggacagtgcgcaggtgttcgagacccactgcctgcgcgccgatggcagtcttctgcct
gccgatgtctcgctgagcttcctgcgttttcgtgatgcggaatacctggtggtgtttctc
agtgatgtcagcgaacgacgccgcgctcacgatcagttgcgtgaactgtcggcgcacctg
gaaagcgtgcgtgaagaagagaaggcgcgtattgccagggaagttcatgacgagctgggt
cagatgctgaccgtcttgaagctggaaacatccatgtgcgagctggcgtatgccgatctt
gacccaggcttgagcgaacgtctggacagcatgaagcgccttatttctcaattgtttcaa
ctggtgcgagacgtcgccactgcattgcggccaccgattctcgacgctggcatcgcttcc
gctatcgagtggcaagcgcgccgtttcgaggcgcgtacgcagattccttgtctggtgcag
gtgccggacaacctcccggcgcttagtgatgccagggccacgggcatgttccggattctt
caggaggcgctgaccaacgtcatgcgccacgctcaggcgcacacggtggagatcagcctg
acgctgcaagacggcatgatgtgcatgaccgtcgccgatgacggtcaggggtttgtcgtc
gagtcgggcagggcggtttcattcggtctggtcgggatgcgcgagcgggtgttgatgctg
ggcggcagactggaactggacagcgaggccggtgaaggcacaaccttgcgcgcctacatt
ccgttggaccccaccgcacaggagcgaagccagtga
DBGET
integrated database retrieval system
