Pseudomonas syringae pv. tomato DC3000: PSPTO_0565
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Entry
PSPTO_0565 CDS
T00118
Name
(GenBank) polyamine ABC transporter, permease protein
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPTO_0565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_0565
Transporters [BR:
pst02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSPTO_0565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Lips
Mob_CxxC_CxxC
Motif
Other DBs
NCBI-ProteinID:
AAO54107
UniProt:
Q88A32
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All DBs
Position
621103..621924
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AA seq
273 aa
AA seq
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MLNAYTSPIERIWYYALRILCALILLFLVLPVLVIVPLSFNSGSFLVYPLQGFSLQWYQD
FFNSAEWMRALKNSMIVAPAATLLAMGFGTLAAIGLTRGNFPGKALVMALVISPMVVPVV
IVGVASYLFFAPLGLGNSYTSLILVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASP
LTAFRRVTLPLIAPGVISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPT
IAAAATLLIGFSVLLLLVLEWLRGRSEKLRTAQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatgcctacacatcgccgatcgagcgcatctggtattacgccttgcgcatcctc
tgcgcgctgatcctgctctttctcgtgttgccggtgctggtcatcgtgccgttgtcgttc
aattcggggagctttctggtctatccgctgcaaggcttttcgttgcagtggtaccaggac
ttcttcaattctgccgagtggatgcgggcgctgaaaaacagcatgatcgtcgccccggcc
gcgaccctgttggcaatgggcttcggcacgcttgcggcgatcggcctgacccggggcaat
tttcccggcaaggcgctggtcatggccttggtgatttcgccgatggtggtgccggtggtg
atcgttggtgtggccagttacctgttcttcgcgccactgggcctgggtaacagctacacc
tcgctgattctggtccacgccgtgctgggtgtgccgttcgtgatcattaccgtgtcggcg
accttgcagggcttcaaccacaacctggtacgcgctgcggcaagcctcggtgcgtcgccg
ctgaccgctttccgccgtgtgaccctgccgttgattgcgccgggggtgatttccggtgcg
ctgttcgcctttgcgacgtcgttcgacgaagtggttgtgacgctgtttctcgccgggccg
gaacaggcaaccttgccccggcagatgttcagcggcatccgcgaaaacctcagcccgacc
atcgcagcggccgcgacgctactgatcggcttctcggtgctgttactgctggtgctggaa
tggctgagagggcgtagcgagaaactgagaacggctcagtga
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