Pseudomonas syringae pv. tomato DC3000: PSPTO_0776
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Entry
PSPTO_0776 CDS
T00118
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSPTO_0776 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_0776 (recC)
Enzymes [BR:
pst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSPTO_0776 (recC)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSPTO_0776 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AAO54318
UniProt:
Q889H3
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All DBs
Position
832977..836453
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AA seq
1158 aa
AA seq
DB search
MSVTTPLSAGFMVVQGNRPDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DAQDDDNGGCGIAAAIDVQLPGSFMWTLYRRVLGSDEIPQTSLLDKTPLTWRLMRLLPAL
INQPHFEPLQRFLTDDTDLRKRYQLSERLSDLFDQYQVYRADWLEDWAAGLHQLRDARGQ
PRPLSTANCWQAELWRALLDDVGAKGMAQSRAGVHRRFIERIGTMTEAPPGLPSRVIVFG
ISSLPAQALEALAGLAKFSQVLLCVHNPCRHHWTDIVADKDLLRHQYKRQARKTGMPMIL
DPQALHQHAHPLLAAWGKQGRDYINLLDSHDDPRSYRSSFKDERIDLFSEVEPTNLLNQL
QDDILELRPLDETREIWPAIDPLEDRSLRFHVAHSAQREVEVLHDQLLARFSKDPNLRPR
DVIVMVPDIDSYAPHIRAVFGQIEREDRRFIPFTLADQGQRGREPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFRIQERDLPTLHRWIEGAGIRWGLNAQQRAGLGLPDALEQNS
WHFGLRRMLLGYAVGAGTAYDGIEPYDEIGGLDAALIGPLVALIDGLQVAHTELSTPATP
EQWGARLQAILQLFFIAESEHDDYLLAQLETLRENWLETCAAVNLIDELPLTVVREAWLA
GLDQGRLSQRFLAGSVNFCTLMPMRAIPFKVVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEAVLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHLASGWKLAG
EADPDSKLDDGERLLKALTVHHPLQPFSANYFHAGTGYFSFAREWRLLHETDLQVPVPQA
LPPHEQEEPLSIAQLQDFLRNPVKHFFSQRLKIYFEVAEAPLADEEPFVLDALERYGLSE
SLLNAAMVSPDNSDVALKAQALKLQASGLLPLAGFGTCMQDELIEPLPDVLRRYHDLLTL
WPETLSSALPISFSHRGVSIDGWLGGLHRNTRGELLLVTAIPNSIGSKKTRKWHRLIRPW
VNHLVACACELPLSTALVASDETLMLDPLEKDAAITTLNHLLMAWLRGMQQPLPVAVKTA
FAWLGQPADKAEAAARKAYEGDGQTTDGERRESTALARQFADFDALMDSEEFAGWCETLY
KPIYDAPWQSLSGGEGGA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttacaaccccgctgagtgcaggtttcatggtggttcaaggcaaccgcccggat
gaactgcgcagtctggttgtgtcctggatgcgtcgctatcccctggcaccgcttgagaac
gagattgcgctggtgcagagcaacggcattgcgcaatggctcaaacttgcgctggctgaa
gacgctcaggacgatgacaacggcggctgcggcattgcggctgcgatagatgttcagctc
cctggcagtttcatgtggacgctgtatcgcagggtcctcggcagcgatgaaattcctcag
acgtctctgctcgacaagaccccgctgacctggcgcttgatgcgcttgcttcccgcactg
atcaatcagccccacttcgagccactgcagcgctttctgaccgacgacaccgacctgcgc
aagcgctatcaattatccgaacgcttgtctgatctgttcgaccaatatcaggtctatcgc
gctgactggctggaagactgggccgcaggcctacaccaattgcgcgacgcacgaggtcag
ccacggcccttgtccactgccaattgctggcaggccgagttatggcgcgcactgctggat
gatgtcggagccaagggcatggcccagagccgtgctggcgtgcaccggcggtttatcgag
cgcattggcaccatgaccgaagcgccgcctggcttgccatcgcgggtaatcgtattcggc
atatcgtcactcccggcgcaggcgctggaagcactggccggcttggcgaagttcagccag
gtgctgctctgtgtgcacaacccctgccgtcaccactggaccgacatcgtcgctgacaag
gacctgctgcgtcatcagtacaagcgtcaggcccgcaagaccggtatgccgatgatcctc
gatccgcaagcgctgcatcagcatgcgcatccgctgctcgctgcctggggaaagcagggc
cgtgattacatcaacctgctggacagccatgacgatccgcgcagctatcgttcgtcattc
aaggacgagcggattgacctgttcagtgaggtcgagccaaccaatctgctgaaccagttg
caggacgatattctcgaactgcgcccgctggatgaaacgcgggagatatggccagccatt
gacccgcttgaagaccgctcgctccggtttcacgttgcccacagcgcgcagcgtgaagtg
gaagtgctgcatgaccagctcctggcgcggttcagcaaagaccccaacctgcgcccgcgt
gatgtgattgtcatggttccggacatcgacagctacgcgccacacattcgcgctgtcttc
ggccagatcgaacgcgaagatcgccgttttattcccttcacgctggccgatcaggggcaa
cgtggtcgtgagccattgctgatcgctgtcgagcatctgcttaagctccccgacagccgc
ttcccggtcagcgaaattctcgacctgctggacgttccggccttgcgagcgcgctttcgc
attcaggagcgcgatctgccaaccctgcatcgctggattgaaggcgcaggcatccgctgg
ggcctcaatgcgcagcaacgcgccggtctggggttgccggatgcgctggaacagaacagc
tggcacttcggcctgcgccgcatgttgctaggttacgctgtgggtgccggtaccgcttat
gacggcattgagccctacgacgagatcggcgggctggatgctgcattgataggcccgctg
gtagcgttgatcgatgggctgcaggttgcccatacagagctgtccacgcccgccaccccg
gagcaatggggcgcacgcttgcaagccattctccagctgttcttcattgctgaaagcgag
catgacgactacctgcttgctcagctcgaaacactgcgtgaaaactggctggaaacctgt
gcagcggtaaacctgattgatgagctgccgctgaccgtggtccgtgaggcctggcttgcc
gggcttgatcagggccgcttgtctcagcgttttctggcaggctcggtcaacttctgcacg
ttgatgcccatgcgcgccatcccgttcaaagtggtctgcctgttgggcatgaacgatggc
gattacccgcgcgcgcaacccccgctggacttcgacctgatgggcagtgattaccgcccc
ggtgaccgttcgcgtcgtgaagatgaccgttatctgttgctcgaagccgtgctctcggcg
cgggatcaactgtacgtcagctgggttggccgcagcattcgtgacaacagcgagcgccct
gcatcggtactgattggccagctgcgtgatcacctggccagtggctggaaactggcaggc
gaagccgaccctgacagcaaactggacgacggcgaacgtcttctgaaagcactgacggtg
catcacccgctgcagccgttcagcgccaattactttcatgcaggcaccggctacttcagc
ttcgcccgcgaatggcgcctgctgcatgaaaccgacctccaggtgcccgtgcctcaagcg
cttccccctcacgagcaggaagagccactgtcgattgcgcaattgcaggacttcctgcga
aacccggtaaagcactttttcagccagcgcctgaagatctatttcgaggtcgccgaagcg
ccgctcgctgatgaagaaccgttcgtgctcgacgcccttgagcgctacggcctcagtgaa
agcctgctcaacgcggcgatggtttcccctgacaatagtgatgtcgccctgaaagcccag
gctctgaaactgcaagccagcggcctgctgcctctcgccgggttcggcacctgcatgcag
gacgaactgatcgagcccttgccggacgtgctcaggcgctaccacgatctgctgacgctg
tggcccgaaaccttgagcagtgccttgccgatcagtttcagccaccgtggcgtcagcatc
gacggctggcttggcgggttacaccgcaacactcgcggcgagctattgctggtcacggcg
attcccaacagcattggctctaaaaagacccgtaagtggcatcgactgattcgcccgtgg
gtgaatcatctggtggcctgcgcctgtgagctgccattgagcaccgcgctggtggccagt
gacgaaaccctgatgctcgacccgctggaaaaagatgctgccatcaccacgctgaaccac
ctgctgatggcctggctgcgcggcatgcaacaaccgctgccggtggccgtcaaaaccgca
tttgcctggctgggccaacccgccgacaaagccgaagccgccgctcgcaaagcctacgaa
ggtgacgggcagaccaccgatggcgaacgacgcgaaagcaccgcgctggcccggcagttt
gcggacttcgacgccttgatggacagcgaggaattcgcgggctggtgcgagacactctac
aagccgatttacgacgcgccctggcagtcgttgtctggcggggagggtggcgcatga
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integrated database retrieval system
