Pseudomonas syringae pv. tomato DC3000: PSPTO_0815
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Entry
PSPTO_0815 CDS
T00118
Name
(GenBank) type IV pilus-associated protein, putative
KO
K02674
type IV pilus assembly protein PilY1
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pst02044
]
PSPTO_0815
02035 Bacterial motility proteins [BR:
pst02035
]
PSPTO_0815
Secretion system [BR:
pst02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
PSPTO_0815
Bacterial motility proteins [BR:
pst02035
]
Pilus system
Pilus assembly proteins
PSPTO_0815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
AAO54357
UniProt:
Q889D5
LinkDB
All DBs
Position
878088..881291
Genome browser
AA seq
1067 aa
AA seq
DB search
MPTAKALRGGLKYLYGALLALYLASPVYAFTPAQVPLLTSPAVPPNLMLLVDNSGSMYNI
IWDSGFDASVNRPDISYFSTQCLSGLITVVCPFLSTLSGDETLSLGDINGTNILTLQLRC
PFGGRPVFRNDIQYCLNLPDPAGNGLTRYTADYLSYLIDLVSPGFFGVRNYTNGVIPNDF
RMNVAKTVATNLVTNNTTLRIGLASFNQPTNSDLGPGGKIARLVTDLSPVAISTFQPSGV
SQQQATQNITDLKTAITNLTPSANTPLAETYYEITRYFRGMSPFYQSGSNYVSPIQYRCQ
KNYGVVVTDGLPTYDRTFPANDPDDVLDTTRSLPNWDLNAANDGDNLSGDGEGDTLYLDD
LAKFAYDIDLRRDAVTTGGDLTGKSWDTAGFAKQNMSTYTIGFTASNQMLNDAADDTHGH
GKYFQANDSTGLTSALNLALSDIYAKVGSGAGGAANSSTLQAGTQFYQTLYDPTDWHGTI
RAFNLDQTTGALSAPVWTTDTAIVSGSTAPVFESWNTVSTSGRIALDYNNFSPAQQAALN
ATLPGNANGIELINWAKGTANAKFRPRTRLLGDIVNSSLGTAFPKQKTAADLTGDTTYTT
YLAIKANSMSSSILANANDGFFNVINSGDGSRRYAYMPSTALTSLATIASTTYGSGVHKF
TVDGQIAVFDTQLAAGSSWRTVAYGGTGAGGKAFFAIKLFEGVSNTVSALWEVKAPDTSD
TNNKFNNLGYAYARPDVARMADGTGIVVVGNGYGSFTGRASLYVLNANTGAFIAEIQTPI
LNSETDNGLSSVKLRVNSQNVVQAAYAGDLKGRLWKFDLSGATAASWKIAFGGAPLFTAP
RGANQPITVQPFVLDHPLNGKIVYFGTGKFLEVADKQTSALQDFYAIWDADSGAGGTVEA
NLQAQAVNGSVVSNGTTYFTSTTNDVDWSVKKGWYMPLSAVAPYLGERIIYPAQTSRGRI
IFSTASVNSADPCESTGTGRVFELNAATGSMLNYQVLDTNGDNSINNSDLFAAGIGYTGI
PVVSAIVSGTGDGNEVKIINNSTGNTPDVLKEKGGSGNQRIMWRQIQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgctaaggcgcttcgtggtggcttgaaatacctctatggcgctttgctggcg
ctgtatctggcgagcccggtttatgccttcacgccggcgcaagtccctttgttgacctcc
ccggcagtgccgcccaatctgatgttgctcgtggacaactcgggcagtatgtacaacatc
atctgggattcggggtttgacgcgtcggtcaatcgtccggacatcagttacttctcaacg
cagtgcttaagcggtttgataacagtagtttgcccatttttgagcaccctgtcgggtgat
gaaacgctctcgctgggcgatatcaatggtaccaatatcctcacgttgcaactgaggtgt
ccgtttggggggcgtccggtttttcgtaatgacattcagtactgtctgaacctgcccgat
ccggccggtaacgggctgacgcgttatacggctgattacctgtcctatcttattgatctg
gtcagccctggcttttttggcgttcgcaactacaccaatggcgtgatcccgaacgacttc
agaatgaatgtcgcgaaaaccgtagcgaccaacctggtaaccaacaatacgacgctcaga
atcgggctcgcgtccttcaaccaaccgaccaacagtgaccttggcccaggaggcaagatt
gccaggcttgtcactgacctgtctccggtagcgatcagtacctttcaaccttccggcgtg
tctcaacagcaggccactcaaaatatcactgacctcaagaccgctatcaccaacctgacg
ccgtcagccaacacgccactggctgaaacctattacgagatcacgcggtattttcgcggt
atgtcaccgttctatcaaagcggctccaactacgtgagtccgattcaataccgctgccag
aaaaactacggtgttgtggttaccgatggcctgccgacctatgaccggacgtttccagcc
aacgaccctgacgatgttctggacaccacgcgctcattacccaactgggatttaaatgca
gccaatgacggcgacaacctgtccggtgatggtgaaggggatacactttatctggacgac
ctggccaaatttgcctatgacatcgacctgcggcgggatgcggtgacgactggcggcgac
ctgaccggaaaaagctgggataccgcaggctttgcgaagcagaacatgagcacttacacc
atcgggttcaccgcatctaaccagatgctgaacgatgctgccgacgatacccatggccat
ggcaaatactttcaggccaatgacagcacggggctgacttcagccttgaatctggcgttg
agcgatatttacgccaaagtcggctctggcgcaggtggggcagcgaactcatcaacgctc
caggcgggtacccagttttaccagacgctctatgacccgaccgattggcacggcaccatc
agagccttcaatctggatcagaccacgggagcattgagtgcccccgtatggactaccgac
actgccattgtcagtggatcaacggcaccggtttttgaatcctggaacacggtttccact
tcgggaaggatcgctctggattacaacaacttcagccctgctcagcaggcggcactgaat
gcaacattgccaggcaatgccaacggtatagagcttattaactgggccaaaggcactgcc
aacgcgaagtttcggccacgcacccggctgttgggcgatatcgtcaactcttcgctaggt
actgcgttccctaagcaaaagaccgccgccgacctgacgggtgataccacctacaccacc
tatctggccatcaaggcaaacagcatgagctccagcattctggccaatgccaatgacggc
tttttcaacgtcatcaattctggcgatggttcaaggcgctatgcgtatatgccttcgacg
gctctgacgtcgctggcgaccatcgcatcaaccacctatggatctggcgttcacaagttc
accgtcgatggccagatcgcagtgttcgatacacagcttgccgcgggttcctcatggcgc
accgttgcctatggtggtacgggggcgggcggcaaagcgttcttcgcaatcaagttattc
gagggtgtcagcaacactgtcagcgcattatgggaggtcaaggcccccgacacttccgac
accaacaataaattcaacaatcttggctatgcctatgcaaggcctgatgttgcccggatg
gcggatggcaccgggattgtggtggtcggcaacggttacggcagcttcaccggcagagct
tcgctctatgtattgaatgccaacaccggggcgttcattgccgagattcagacaccgatc
cttaatagcgaaaccgataacgggctttcttcggtcaaattgcgcgtcaactctcagaat
gtggttcaggctgcctatgcgggcgacctgaaggggcggttgtggaagttcgacttgagt
ggcgcaaccgctgccagctggaaaatagcgtttggcggcgcgcctttgttcactgcaccg
cgaggcgccaatcagccaataacggttcagccattcgtgcttgatcatccgctcaacggc
aagatcgtgtatttcggcaccggcaagttcctcgaagttgcagacaagcagacctccgct
cttcaggatttctacgcgatatgggatgcggactccggagcgggcggcacggtcgaggcg
aacctgcaagcgcaggcggtcaatggcagtgttgtcagtaacggaaccacctatttcacg
tcgacaaccaacgatgtggattggtcagtcaagaagggctggtacatgccgctttccgcc
gtagcgccctatctgggggagcgaatcatttaccccgcgcagaccagtcgaggccggatt
atcttctcgacagcatccgtgaactccgctgacccctgtgaaagcacaggcaccgggcgg
gtatttgaactcaatgctgccaccggcagcatgctcaactaccaggtgcttgataccaac
ggcgataacagcatcaacaattcagacctgtttgccgccgggatcgggtacacaggtatc
cccgtcgtatccgctatcgtttcgggtaccggggacgggaatgaggtgaagatcattaat
aactccacgggtaacacgcctgatgttctgaaggaaaagggcgggagcggcaaccagcgc
atcatgtggcgacaaatccaatag
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