Pseudomonas syringae pv. tomato DC3000: PSPTO_0829
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Entry
PSPTO_0829 CDS
T00118
Symbol
clpB
Name
(GenBank) clpB protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pst03110
]
PSPTO_0829 (clpB)
Chaperones and folding catalysts [BR:
pst03110
]
Heat shock proteins
HSP100
PSPTO_0829 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
NBD_SMAX1
AAA_24
nSTAND3
IstB_IS21
Mg_chelatase
ATPase_2
AAA_18
TniB
AAA_7
AAA_14
bpMoxR
ABC_tran
Zeta_toxin
DNA_pol3_delta2
NACHT
ATP_bind_1
PduV-EutP
HI_0552
CCDC89
Motif
Other DBs
NCBI-ProteinID:
AAO54370
UniProt:
Q889C2
LinkDB
All DBs
Position
895919..898483
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AA seq
854 aa
AA seq
DB search
MRIDRLTSKLQLALSDSQSLAVGLDHPAIEPAHLMQALLEQQGGSIKPLLLQVGFDINSL
RKELSAELDRLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENS
KLGKLLLGQGVSKKALENAINNLRGEGAVNDPNIEESRQALDKYTVDLTKRAEEGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSL
DMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLK
PALARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVH
HKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLI
QLKVEAQALKKEKDEAAIKRLEKLQEEIVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIE
QSRQELEAARRRGDLNRMAELQYGIIPDLERSLQMVDQHGKPENQLLRSKVTEEEIAEVV
SKWTGIPVSKMLEGEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGS
FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL
GSAQIQELVGDREAQRAAVMDAVSTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRL
RKRLAERELTMVLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILSGGFEPGS
SITGKVVDDEIVFG
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgacagattgaccagtaaattacagttagcgttatcggattcccagtcgctg
gccgtcggcctcgaccatcccgccatcgagcctgcgcatttgatgcaggcactgctcgaa
cagcagggcggttccatcaagccattgctgctgcaagtcggcttcgatatcaacagcctg
cgcaaggaactgagcgctgagctggaccgactgcccaaaatccagaacccgaccggcgac
gtgaatatgtcgcaggacctggcgcgcctgctcaatcaggccgaccgcctggcgcagcag
aagggcgatcagttcatttccagcgagctggtgctgctcgctgcaatggatgagaacagc
aagctcggcaagttgttgctggggcagggcgtcagcaagaaggccctggaaaatgccatc
aataacctgcgcggcgaaggtgccgtcaatgacccgaacatcgaagagtcgcgtcaggcg
ctcgacaagtacaccgttgacctgaccaagcgcgccgaagagggcaagctagacccggtg
attggccgtgatgacgagatccgtcgcaccattcaggttctgcaacgccgaaccaaaaac
aatccggtgctgatcggtgagcccggtgtgggtaaaaccgccatcgccgaaggtctggcg
cagcgcatcatcaatggcgaggtgccggatggcctgcgcggcaagcgtctgctgtcgctg
gacatgggcgcactgattgccggtgccaagtaccgtggcgagttcgaagagcgcttgaag
tcgctgctcaacgagctgtccaagcaggaaggccagatcatcctgttcatcgacgaatta
cacaccatggtcggcgcgggcaagggcgagggctcgatggacgcgggcaacatgctcaag
ccggcactggctcggggcgagttgcactgcgtcggcgccaccacgctcaacgagtaccgc
caatatatcgagaaggacgccgcgcttgagcgtcgtttccagaaagtgctggtggacgag
ccgagcgaagaggacaccattgcaattctgcgtggcctgaaagagcgctatgaagtgcat
cacaaggttgcgatcaccgacggcgcgatcatcgctgcggccaagctgagccatcgctac
atcaccgatcgtcagttgccggacaaggccattgacctgattgacgaagcggccagccgc
attcgcatggagatcgactccaagcccgaagtgctcgaccgtcttgagcgacgtctgatt
cagctgaaagtcgaagctcaggcgctcaagaaggaaaaggacgaggcagccatcaaacgc
ctggaaaaactccaggaagaaatcgtgcgccttgagaaggaatacgccgatctcgaagaa
atctggacttcggaaaaagccgaagtcaccggttctgcgcagatccagcagaaaatagag
cagtcccgtcaggaactggaagcggcgcgtcgccgtggcgacctgaaccgcatggccgag
ttgcagtacggcatcatcccggacctggaacgcagcctgcaaatggtcgatcagcacggc
aagcccgagaaccagttgctgcgcagcaaagtgaccgaagaagaaattgccgaagtcgtc
tccaaatggaccggtattcctgtgtcgaagatgctggagggcgagcgcgagaagctgttg
cgcatggaaaccctgctgcataaccgggtgatcggtcaggaagaggcggtagtggcggtt
tccaacgccgtgcggcgctcgcgtgccgggttgtccgaccctaatcgcccaagcggctcg
ttcatgttcctcggccccaccggcgtgggtaaaaccgaactgtgcaaggcgctggccgaa
tttctgttcgacaccgaagaggcgatggtgcgaatcgacatgtccgagttcatggagaaa
cattccgtggctcgcctgatcggtgcaccacccggctatgtcggttacgaagagggcggc
tacctgaccgaagccgtgcgtcgcaagccgtactcggtgatcctgctcgatgaggtggag
aaggcgcactccgatgtcttcaacatcctgctgcaggtgcttgaagacggacgcctgacc
gacagccacgggcggacagtggatttccgtaataccgtgatcgtcatgacctccaacctg
ggctcggcgcagatccaggaactggtgggtgatcgcgaggcgcagcgtgcggcggtaatg
gacgcagtcagcacgcacttccgtccggagttcgtcaaccggatcgacgaggtggtgatc
ttcgagcccttggcgcgtgatcagattgccggtatcaccgatatccagcttggccgtctg
cgcaagcgtctggccgagcgcgagctgacaatggtgctgagccccgaggcgctcgacaag
ctgattgccgtcggttacgacccggtctatggcgcacggccactcaagcgcgccattcag
cgctggatcgaaaacccgctggcgcaactgatcctctcgggtggcttcgagccgggcagc
agcatcaccggcaaggtggtcgacgacgagatcgtgtttggctga
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