Pseudomonas syringae pv. tomato DC3000: PSPTO_0963
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Entry
PSPTO_0963 CDS
T00118
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSPTO_0963 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pst03019
]
PSPTO_0963 (pcnB)
Enzymes [BR:
pst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PSPTO_0963 (pcnB)
Messenger RNA biogenesis [BR:
pst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSPTO_0963 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AAO54497
UniProt:
Q888Q3
LinkDB
All DBs
Position
complement(1045046..1046449)
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AA seq
467 aa
AA seq
DB search
MLKKLFQSFRSPLRKPQQHTRTTPEVLNSSQHSLQRSQFSRYAVNIVERLQNAGYQAYLV
GGCVRDMMLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRA
NHPQDDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERVLDYANG
VHDIRNRLIRLIGDPEQRYKEDPVRMLRAVRFAAKLDFGIEKHSAQPIRALAPMLRDIPS
ARLFEEVLKLFLSGYAAPTFEMLVDLELFEPLFPASSKALEYNPTYTHTLISNALINTDL
RIKQNKPVTPAFLFAALLWPALPAKVLRAQERGMPPIAAMQDAAHELIIEQCQRIAIPKR
FTLPIREIWDMQERLPRRSGKRADLLLDNSRFRAGYDFLLLRESAGEQTDGLGQWWTDYQ
DCNDSERRDMIRDLSNKPEAAGAAPRKRRRNSGAKRKRSSGEAQSGE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcatttcgttccccactgcgcaaaccgcagcaacacacg
cgcaccacgcctgaagtgctcaatagcagccagcattcgctgcaacgcagccagttcagc
cgttatgccgtcaatattgtcgagcgtctgcaaaatgcaggctatcaggcctatctggtc
ggtggctgcgtacgcgacatgatgctcaatatcacgcccaaggattttgacgtcgccacc
agtgccacgcctgaacaagtgcgtgccgagttccgcaatgcgcggatcattggccgccgg
ttcaagctggtgcacatccacttcggtcgtgaaatcatcgaagtggcgacgttccgcgcc
aatcatccacaggatgatgaagaagaggacagcaaccagtcctcgcgcaatgaaagcgga
cgcatcctgcgtgacaacgtttacggcacgcttgaagaagacgctcagcgtcgcgacttc
acgatcaatgcgctgtattacgacccggtcagcgagcgtgttctggattacgccaacggc
gtgcatgacatccgcaatcgtctgatccgcctgatcggcgaccccgagcagcgttacaag
gaagacccggtgcgcatgctgcgtgccgtgcgcttcgcggccaaactggatttcggcatc
gagaagcacagcgctcagccgatccgcgcactggcaccgatgctgcgcgatattccttcg
gcgcgcctgttcgaagaggtgctcaagctgttcctctccggctacgccgcgccgacgttc
gagatgctggttgacctggagctgttcgagcccctgttcccggccagttcaaaagcgctg
gaatacaacccgacctacacccacacgctgatcagcaatgcgctgatcaacactgacctg
cgcatcaagcagaacaaaccggtcaccccggcgttcctgtttgccgccctgctctggcct
gcgctgccagccaaggtgctgcgtgcccaggaacgtggcatgccgccgattgcagccatg
caggacgccgctcacgagctgatcatcgagcagtgccagcgcatcgcgattcccaagcgc
tttaccctgccgatccgcgaaatctgggacatgcaggagcgcctgccgcgtcgttcgggc
aaacgtgccgacctgttgctggacaactcgcgcttccgtgccggctacgacttcctgctg
ctacgcgaaagcgcgggcgagcagactgacggtctgggccaatggtggaccgattatcag
gactgcaacgacagcgaacgtcgcgacatgattcgtgacctgagcaacaagccagaagcc
gccggcgctgctccgcgcaagcgtcgtcgcaacagtggcgccaaacgcaagcgcagcagt
ggcgaggcgcaaagcggtgagtaa
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