Pseudomonas syringae pv. tomato DC3000: PSPTO_1049
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Entry
PSPTO_1049 CDS
T00118
Symbol
dctM
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSPTO_1049 (dctM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_1049 (dctM)
Transporters [BR:
pst02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PSPTO_1049 (dctM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
AAO54580
UniProt:
Q888H5
LinkDB
All DBs
Position
complement(1146288..1147568)
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AA seq
426 aa
AA seq
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MDAFILLGSFIALILLGMPVAYALGLSALIGAWWIDIPADALMIQIAGGVNKFSLLAIPF
FVLAGAIMAEGGMSRRLVAFAAVLVGFVRGGLSLVNIVASTFFGAISGSSVADTASVGSV
LIPEMERNGYPRDFSTAVTVSGSVQALLTPPSHNSVLYSLAAGGTVSIASLFMAGIMPGL
LLSAVMIGLCMIFARRRNYPKGEVIPLRKALKIAGEALWGMMAMVIILGGILSGIFTATE
SAAIAVLWAFFVTMFIYRDYKWRDLPKLMHRAARTISIVMILIGFAASFGYILTLMEIPM
KITTAFLTLSDNRYVILMCINVMLLLLGTVMDMAPLILILTPILLPVIVGVGVDPVHFGM
IMLVNLGIGLITPPVGAVLFVGAAVGKVTIEATVKALLPFYVALFLVLMLVTYVPAISLW
LPSVVL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttatactgttgggcagcttcatcgcactgatacttctcggcatgccggtt
gcctacgcgctgggcctgtcagccctgatcggtgcctggtggatcgacattccggccgac
gccttgatgatccagatcgcaggcggggtgaacaagttctcgctgctggcgatcccgttc
ttcgtgctggccggggcaatcatggccgaaggcgggatgtcacgacggctggtcgcgttc
gccgcagtactggtgggctttgtgcgcggcggcctgtcgctggtcaacatcgtggcatcg
accttcttcggcgctatctcgggttcttccgtggccgataccgcatcggtaggctcggtg
ctgataccggaaatggaacgcaacggctaccctcgggacttctcgaccgccgtgaccgtc
agcggctcggttcaggctctgcttacgcctcccagccacaactcggtgctttattcactg
gccgctggcggcacggtatcgattgcctcgctgttcatggccgggatcatgccagggctg
ttgctcagcgcggtgatgattggcctgtgcatgattttcgcgcgccgacgcaattacccc
aagggtgaagtgattccgctgcgcaaagcgctgaaaattgccggtgaagcgctctggggc
atgatggccatggtcatcattctcggtggcattctgtcggggatcttcaccgccaccgag
tcggctgccattgccgtgctctgggcgttcttcgtcaccatgttcatttaccgcgactac
aaatggcgcgatctgcccaagctgatgcaccgggctgcgcggaccatctccatcgtgatg
atcctgatcggttttgccgccagcttcggttacatcctgacgctgatggaaatcccgatg
aagatcaccacggcgttcctgaccctgtcagacaaccgctacgtgatcctgatgtgcatc
aacgtcatgttgctgctgttgggcactgtcatggacatggccccgctgatcctgatcctc
acgccgattctgttgccggtcatcgtcggcgtcggcgtggacccggtgcacttcggcatg
atcatgctggtcaatctggggatcgggctgatcacaccgccggtgggcgcagtgctgttc
gtcggcgcggcggtgggcaaagtcaccatcgaagccaccgtgaaagccttgctgccgttc
tacgtcgcgctgtttctggtgctgatgctggtcacctacgttcctgccatctcgctgtgg
ctgccgagcgtcgtgctctaa
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