Pseudomonas syringae pv. tomato DC3000: PSPTO_1266
Help
Entry
PSPTO_1266 CDS
T00118
Name
(GenBank) DNA-binding protein HU family
KO
K03530
DNA-binding protein HU-beta
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pst03032
]
PSPTO_1266
03036 Chromosome and associated proteins [BR:
pst03036
]
PSPTO_1266
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_1266
DNA replication proteins [BR:
pst03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSPTO_1266
Chromosome and associated proteins [BR:
pst03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PSPTO_1266
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PSPTO_1266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
HTH_IclR
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AAO54791
UniProt:
Q887M5
LinkDB
All DBs
Position
1387607..1387888
Genome browser
AA seq
93 aa
AA seq
DB search
MALTKDQLIADIAEAIDAPKTTARNALEQLGQIVADQLENGVEITLPGIGKLKVAERPAR
TGRNPSTGAAIEIAAKKVIKFVPAKVLTDSINK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctcttactaaagaccaattgatcgccgatatcgctgaagctatcgacgcgccaaaa
accaccgcgcgtaatgctcttgagcaattgggccaaattgttgccgaccaattggaaaac
ggcgttgaaatcactttgccgggtatcggcaagctgaaagttgcagagcgtccagctcgc
accggccgcaacccttcgactggcgctgccatcgaaatcgctgccaagaaagttatcaag
ttcgtaccagccaaagtgctgaccgactcgatcaacaagtaa
DBGET
integrated database retrieval system
