Pseudomonas syringae pv. tomato DC3000: PSPTO_1272
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Entry
PSPTO_1272 CDS
T00118
Name
(GenBank) membrane protein, putative
KO
K07091
lipopolysaccharide export system permease protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSPTO_1272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_1272
Transporters [BR:
pst02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
PSPTO_1272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AAO54797
UniProt:
Q887L9
LinkDB
All DBs
Position
1395310..1396437
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AA seq
375 aa
AA seq
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MIVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFL
QVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAALVGLLVAWLSFSL
APQGAAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKR
MSNDKSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAAL
PKPEISEEITDREAIPTSELFGNPAPRSVAELQWRISLPLSVFIVTLMAIPLSRVNPRQG
RYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYLGIGLVLFYWEPLRLK
MASRRSVTEVTRGQA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgattgtcttccgttatctgtcccgagaagtgctgcttaccctgagtgcggtcagcgcc
gtgctgctggtgttcatcatgagcgggcgcttcatcaagtacctggcgcaggctgcgtcc
ggcgcgcttgatcctggcgtgctgttcctgatcatgggctttcgcctgccgggttttttg
caggtgatcctgccgctgggcctgttcctcggcatcctcatggcgtacgggcgcctgtat
ctggagagtgaaatgaccgtgctggccgcgaccggcatgagccagcagcgtctgcttgct
atcaccatgggcccggcagcgttggtcgggttgctggtcgcctggctgagtttcagcctg
gctccccagggcgctgcgcagttttcgcaactgattaaccagcaggacgccatgaccgag
ttcgacacgctggtgccgggacgtttccaggcattgcgtgacggtacgcgtatcacctac
accaaagagctgtcggaagatcgctcgcagctggcgggcgtgttcatctctgaaaagcgc
atgtccaacgacaagagcaaggacaacggcattaccgtgctggtggccgagaaggggcac
caggaggtccagcccaatggcagtcgcttcctgatcctcgaaaacggctaccgctacgat
ggcaatccgggtgccgctgactaccgcgtggtcaagtacgacacgtatggggcggcgttg
cccaagccggaaatcagcgaagaaatcactgaccgcgaagccattccgaccagcgagctg
ttcggcaaccctgcaccgcgttccgttgctgaattgcagtggcgcatttcgctgccgctg
tcggtgttcatcgtcaccttgatggccatcccgttgtcacgggtcaatccgcgtcagggc
cgttacctgaagctgctgccggcgatccttctgtacatgtcttacctggccattctgatt
tcggtgcgcagttcgctggagaaaggcaagctgcccctcagcctcggcatgtggtgggtt
catggcatttatctgggcatcggtctggtgctgttttactgggagcctctgcgtctgaag
atggcgagtcgtcgcagcgtcacggaggtgactcgtggtcaagcttga
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