Pseudomonas syringae pv. tomato DC3000: PSPTO_1276
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Entry
PSPTO_1276 CDS
T00118
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00260
Glycine, serine and threonine metabolism
pst00630
Glyoxylate and dicarboxylate metabolism
pst00670
One carbon pool by folate
pst00785
Lipoic acid metabolism
pst01100
Metabolic pathways
pst01110
Biosynthesis of secondary metabolites
pst01200
Carbon metabolism
Module
pst_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSPTO_1276 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSPTO_1276 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PSPTO_1276 (gcvP)
00670 One carbon pool by folate
PSPTO_1276 (gcvP)
Enzymes [BR:
pst01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PSPTO_1276 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AAO54801
UniProt:
Q887L5
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Position
complement(1399420..1402284)
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AA seq
954 aa
AA seq
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MTDRIELTTANEFIARHIGPRAADELAMLHTLGFDSIEALSDSVIPESIKGTSVLNLPAG
QSEADALASIKAIASKNQLFKTYIGQGYYNTHTPAPILRNLLENPAWYTAYTPYQPEISQ
GRLESLLNFQTLISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKGSQQFFASSHCHP
QTLDVLRTRAEPLGITVVVADETELGDVSDYFGALLQYPASNGDVFDYRELAERFHGANA
LVAVAADLLALTLLTPPGEFGADVAIGSAQRFGVPLGFGGPHAAYFSTRDAFKRDMPGRL
VGVSVDRHGKQALRLAMQTREQHIRREKATSNICTAQVLLANIASMYAVYHGPRGLTQIA
NRVHHLTAILAEGLSQLGLNAEQAYFFDSLTLHTGGRTAALHAAARARHINLREIDDQRL
GLSLDETTSQSAVEVLWDIFASTGQTLPDFTALAASVKSRLPAALLRQSAILSHPVFNRY
HSETELMRYLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEFGNLHPFAPAEQS
AGYQQLTDELEAMLCAATGYDAISLQPNAGSQGEYAGLLAIRAYHQSRGDEHRDICLIPS
SAHGTNPATANMAGMRVVVTACDARGNVDIEDLRAKALQHREQLAAIMITYPSTHGVFEE
GIREICGIVHDNGGQVYIDGANMNAMVGLCAPGKFGGDVSHLNLHKTFCIPHGGGGPGVG
PIGVKSHLAPFMPGHARMQRKEGAVCAAPFGSASILPITWMYIRMMGGEGLKRASQLAIL
NANYISRRLEEHYPVLYTGTNGLVAHECILDLRPIKDSSGISVDDVAKRLIDFGFHAPTM
SFPVAGTLMIEPTESESREELDRFCDAMIKIREEIRAVEDGTLDKDDNPLKNAPHTAAEI
VGQWSHPYSREQAVYPVDSLIENKYWPPVGRVDNVFGDRNLVCACPSIESYQEA
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgcattgaactgaccaccgccaacgaattcattgcccgccacattggcccg
cgtgccgctgacgagctggccatgctgcacaccctgggttttgactccattgaagcactc
agcgacagcgtgatcccggaaagcatcaagggcaccagcgtgctgaacctgcctgccggg
cagagcgaagccgatgcactggcctccatcaaggccatcgccagcaagaaccagctgttc
aagacctacatcggtcagggttactacaacacccacacacccgccccgattctgcgcaac
ctgctggaaaacccggcctggtataccgcctacacgccctaccagcctgagatttcccaa
ggccgtctggagtcgctgctcaatttccagaccctgatcagcgacctgaccggcctgccg
attgccaacgcctcgctgctcgacgaagccactgccgctgccgaagcgatgacgttctgc
aagcgcctgagcaagaacaaaggcagccagcagttcttcgcctccagccactgccacccg
cagacactcgatgtgctgcgcactcgcgccgagccgctgggcatcaccgttgtggtggcc
gatgaaaccgaactgggcgatgtcagcgactactttggtgcgctgctgcagtacccggcc
agtaatggcgacgtattcgactaccgcgaactggccgagcgctttcacggggcaaacgca
ctggtggcggtcgccgccgacctgctggccctgaccctgctgaccccgccgggtgaattc
ggtgccgacgtggccatcggcagcgcgcaacgctttggcgtaccgctgggctttggtggc
ccgcacgcggcctatttctcgacgcgcgatgcgttcaagcgtgacatgccgggccgtctg
gttggcgtgtcggtggatcgccacggcaaacaggctctgcgcctcgccatgcagacccgc
gaacaacacattcgtcgcgaaaaggccaccagcaacatctgcaccgcgcaagtgctgctg
gccaacatcgccagcatgtacgccgtgtatcacggcccgcgcggcctgacacagatcgcc
aatcgtgtgcaccacctgaccgcgatcctggccgaaggcttgagccagttgggcctcaac
gccgagcaggcctatttcttcgacagcctgactttgcacactggcggccggaccgccgcg
ctgcacgctgccgcccgcgcccgccacatcaacctgcgcgaaatcgacgaccagcgtctg
ggcctgtcgcttgacgaaaccacctcgcagtcagcggtcgaagtgctctgggacattttc
gccagcacgggccagactctgccggacttcaccgcattggccgccagcgtcaagtcgcgc
ctgccagcagccttgctgcgccagtcggcgatcctcagccacccggtgttcaaccgctat
cactcggaaaccgagctgatgcgctacctgcgcaaactggccgacaaggacctggcgctg
gaccgcaccatgatcccgctcggctcgtgcaccatgaaactcaatgcggccagcgaaatg
atcccggtaacctgggccgagttcggcaacctgcacccgttcgcccccgccgagcaaagc
gccggttaccagcaactgaccgacgagttggaggccatgctctgcgccgccaccggctat
gacgccatttcgctgcaacccaacgccggttcgcagggtgaatacgccggcctgctggcc
attcgcgcctaccaccagagccgtggcgatgaacaccgcgacatctgcctgatcccttcg
tcggcccacggcaccaacccggcgaccgctaacatggccggcatgcgcgtggtggtgaca
gcctgcgatgcgcgcggcaacgtcgacatcgaagacttgcgggccaaggcacttcaacac
cgcgagcagcttgcggcgatcatgatcacctacccgtcgacccacggcgtgttcgaagag
ggcattcgcgaaatctgcggcatcgttcatgacaacggcggccaggtctacatcgacggt
gccaacatgaacgcgatggttggcctttgcgctccgggcaagttcggcggcgacgtgtcg
cacctcaacctgcacaagaccttctgcattcctcacggcggcggcgggccgggcgtgggt
ccgatcggcgttaaatcgcacctcgcaccgttcatgccgggccacgcacgcatgcaacgc
aaggaaggcgcggtctgcgcagcgccgttcggcagcgccagcatcctgccgatcacctgg
atgtacatccgcatgatgggcggcgaaggtctgaaacgcgcctcgcaattggcgatcctc
aacgccaactacatttcgcgtcgcctggaagagcactacccggtgctgtacaccggcacc
aacgggctggtagcccacgaatgcatccttgacctgcgcccgatcaaagacagcagcggc
atcagcgtcgatgacgtggccaaacgcctgatcgacttcggcttccatgccccgaccatg
tcgttcccggtcgctggaacgttgatgatcgagccgaccgaaagcgaatcccgcgaagaa
ctggaccgtttctgcgacgccatgatcaagatccgcgaagaaatccgcgcagtcgaagac
ggcaccctggacaaagacgacaacccgttgaaaaacgccccgcataccgcggcggaaatc
gtcggccagtggagccatccttacagccgcgagcaggcggtgtacccggtcgattcgctg
atcgagaacaagtactggcctccggtcggacgcgtcgacaacgtattcggtgaccgcaat
ctggtctgtgcctgcccttccatcgagagctatcaggaagcctga
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