Pseudomonas syringae pv. tomato DC3000: PSPTO_1288
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Entry
PSPTO_1288 CDS
T00118
Symbol
edd
Name
(GenBank) 6-phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00030
Pentose phosphate pathway
pst01100
Metabolic pathways
pst01120
Microbial metabolism in diverse environments
pst01200
Carbon metabolism
Module
pst_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
PSPTO_1288 (edd)
Enzymes [BR:
pst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
PSPTO_1288 (edd)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AAO54812
UniProt:
Q887K4
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All DBs
Position
1416479..1418305
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AA seq
608 aa
AA seq
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MHPRVLEVTERLIARSRDTRQRYLQLIRGAASDGPMRGKLQCANFAHGVAACGPEDKQSL
RLMNAANVAIVSSYNEMLSAHQPYEHFPAQIKQALRDIGSVGQFAGGVPAMCDGVTQGEP
GMELAIASREVIAMSTAIALSHNMFDAAMMLGICDKIVPGLMMGALRFGHLPTIFVPGGP
MVSGISNKEKADVRQRYAEGKASREELLDSEMKSYHGPGTCTFYGTANTNQLVMEVMGMH
LPGASFVNPYTPLRDALTAEAARQVTRLTMQSGSFMPIGEIVDERSLVNSIVALHATGGS
TNHTLHMPAIAQAAGIQLTWQDMADLSEVVPTLSHVYPNGKADINHFQAAGGMSFLIREL
LAAGLLHENVNTVAGYGLSRYTKEPFLEDGKLVWREGPLDSLDENILRPVARPFSPEGGL
RVMEGNLGRGVMKVSAVALEHQIVEAPARVFQDQKELADAFKAGELECDFVAVMRFQGPR
CNGMPELHKMTPFLGVLQDRGFKVALVTDGRMSGASGKIPAAIHVCPEAFDGGPLALVRD
GDVIRVDGVKGTLQVLVEASELAAREPAINQIDNSVGCGRELFGFMRMAFSSAEQGASAF
TSSLETLK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcatccccgcgtccttgaagtaaccgagcggctcattgctcgcagtcgcgatacccgt
cagcgctaccttcaattgattcgaggcgcagcgagcgatggcccgatgcgcggcaagctt
caatgtgccaactttgctcacggcgtcgccgcctgcggaccggaggacaagcaaagcctg
cgtttgatgaacgccgccaacgtggcaatcgtctcttcctacaatgaaatgctctcggcg
catcagccctacgagcactttcctgcacagatcaaacaggcgttacgtgacattggttcg
gtcggtcagtttgccggcggcgtgcctgccatgtgcgatggcgtgactcagggtgagccg
ggcatggaactggccattgccagccgcgaagtgattgccatgtccacggcaattgccttg
tcacacaatatgttcgacgccgccatgatgctgggtatctgcgacaagatcgtccccggc
ctgatgatgggggcgttgcgtttcggtcatctgccgaccatcttcgtgccgggcgggccg
atggtgtcaggtatctccaacaaggaaaaagccgacgtacggcagcgttacgctgaaggc
aaggccagccgtgaagagctgctggactcggaaatgaagtcctatcacggcccgggaacc
tgcacgttctacggcaccgccaacaccaatcagttggtgatggaagtcatgggcatgcac
cttcccggtgcctcgttcgtcaatccctacacaccactgcgtgatgcgctgacagctgaa
gcggctcgtcaggtcacgcgtctgaccatgcaaagcggcagtttcatgccgattggtgaa
atcgtcgacgagcgctcgctggtcaattccatcgttgcgctgcacgccaccggcggctcg
accaaccacacgctgcacatgccggcgattgctcaggctgcgggtattcagctgacctgg
caggacatggccgacctctccgaagtggtgccgaccctcagtcacgtctaccccaacggc
aaggccgacatcaaccatttccaggccgcaggcggcatgtcgttcctgattcgcgagctg
ctggcagccggtctgctgcacgaaaacgttaacaccgtggccggttatggcctgagccgc
tacaccaaagagccattcctggaggatggcaaactggtctggcgtgaaggcccgctggac
agcctggatgaaaacatcctgcgcccggtggcgcgtccgttctcccctgaaggcggtttg
cgggtcatggaaggcaacctgggtcgcggtgtcatgaaagtatcggccgttgcgctggag
catcagattgtcgaagcgccagcccgagtgtttcaggatcagaaggagctggccgatgcg
ttcaaggccggcgagctggaatgtgatttcgtcgccgtcatgcgttttcagggcccgcgc
tgcaacggcatgcccgaactgcacaagatgaccccgtttctgggcgtgctgcaggatcgt
ggtttcaaagtggcgctggtcaccgatggacggatgtcgggcgcctcaggcaagattccg
gcggcgattcacgtctgcccggaagcgttcgatggtggcccgttggcactggtacgcgac
ggcgatgtgatccgcgtggatggcgtaaaaggcacgttacaagtgctggtcgaagcgtca
gaattggccgcccgagaaccggccatcaaccagatcgacaacagtgtcggctgcggtcgc
gagctttttggattcatgcgcatggccttcagctccgcagagcaaggcgccagcgccttt
acctctagtctggagacgctcaagtga
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