Pseudomonas syringae pv. tomato DC3000: PSPTO_1375
Help
Entry
PSPTO_1375 CDS
T00118
Symbol
hopM1
Name
(GenBank) type III effector HopM1
KO
K13461
effector protein HopM1
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
PSPTO_1375 (hopM1)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
AAO54897
UniProt:
Q887D0
LinkDB
All DBs
Position
1511461..1513599
Genome browser
AA seq
712 aa
AA seq
DB search
MISSRIGGAGGVELSRVNQQHDTVPAQTAHPNAVTAGMNPPLTPDQSGSHATESSSAGAA
RLNVAARHTQLLQAFKAEHGTAPVSGAPMISSRAALLIGSLLQAEPLPFEVMAEKLSPER
YQLKQFQGSDLQQRLEKFAQPGQIPDKAEVGQLIKGFAQSVADQLEHFQLMHDASPATVG
QHAKADKATLAVSQTALGEYAGRASKAIGEGLSNSIASLDEHISALDLTLQDAEQGNKES
LHADRQALVDAKTTLVGLHADFVKSPEAKRLASVAAHTQLDNVVSDLVTARNTVGGWKGA
GPIVAAAVPQFLSSMTHLGYVRLSTSDKLRDTIPETSSDANMLKASIIGMVAGIAHETVN
SVVKPMFQAALQKTGLNERLNMVPMKAVDTNTVIPDPFELKSEHGELVKKTPEEVAQDKA
FVKSERALLNQKKVQGSSTHPVGELMAYSAFGGSQAVRQMLNDVHQINGQTLSARALASG
FGGAVSASSQTLLQLKSNYVDPQGRKIPVFTPDRAESDLKKDLLKGMDLREPSVRTTFYS
KALSGIQSSALTSALPPVTAQAEGASGTLSAGAILRNMALAATGSVSYLSTLYTNQSVTA
EAKALKAAGMGGATPMLDRTETALNNIRHPNRESLPHTFQKSTLSGIPRVAENAYHMGRG
ALQLPTQMAVDTVRVVDEGVLNAVASAREALKQPTKDDDALRALEEGLLDPR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatcagttcgcggatcggcggggccggtggcgtcgaactcagccgggtaaaccagcag
cacgatactgttcccgcccagacagctcacccaaatgcagtcactgcaggcatgaatccg
ccgctgactcccgatcagtcagggtcacacgcgacagaaagctcgtctgccggcgcggcg
cggctgaatgtcgcggctcgacacacacagcttttgcaggccttcaaggctgagcatggg
acggctccggtcagcggcgcgccgatgatcagttcgcgtgctgcgttgttgatcggtagt
ctgctgcaggccgagcctttgccttttgaagtcatggccgagaaattgtctcctgagcgc
tatcaactgaagcagtttcagggctcggacttgcagcagcggctggaaaaattcgcccag
ccgggtcagataccggataaagccgaggtcgggcaactgatcaagggttttgctcagtcg
gtcgctgatcaactggagcactttcaactgatgcatgacgcttcgcccgcaacggtaggc
cagcatgcaaaagcggacaaggcgacgcttgccgtcagtcagactgcccttggcgaatac
gccggtcgtgcaagcaaggcaatcggcgaaggcctgagcaacagcatcgcgtcgctggat
gagcacatcagtgcgctggatctcactctgcaagatgccgaacagggcaacaaggagtct
ctgcacgctgacaggcaggcgctggtcgacgccaaaaccaccctggtaggtttgcacgcc
gatttcgtcaagtcgccggaggccaagcgccttgcttcggtcgccgcacatacgcaactg
gacaacgtcgtcagcgatctcgtcactgcccgtaacacggtgggtggctggaaaggtgca
gggccgattgtcgcggctgcggttccgcagttcttgtcttcaatgacacacttgggttat
gtgcgtttgtccaccagcgacaagctgcgagacacgattcccgagaccagcagcgacgcc
aacatgctcaaggcttcgataatcgggatggtggcgggcattgctcacgagacggtcaac
agcgtggtcaagccgatgtttcaggccgccttgcagaagactggcctcaacgaacgcctg
aacatggtgccaatgaaggctgtggataccaatacggttattcctgaccccttcgagctg
aaaagcgaacacggtgagctggtcaaaaaaacgcccgaggaagtcgctcaggacaaggcg
ttcgtgaaaagtgaacgcgcgctgctgaaccagaagaaggttcagggttcgtccacccat
ccggtaggtgagctgatggcttacagtgccttcggtggttctcaggctgtgcgccagatg
ctcaacgatgttcaccagatcaatgggcagacgctgagtgcaagagctctggcatccggt
tttggcggggcggtgtctgccagttcgcaaacgctgctgcaattgaagtcgaattatgtc
gacccgcaagggcgcaaaattccggtatttaccccggaccgcgccgagagcgatctgaaa
aaggacctgctcaaaggtatggacctgcgcgagccgtcggtacgcaccacgttctacagc
aaggctctttcgggtattcagagttctgcactgacctcggcactgccgcctgtgaccgct
caggctgaaggcgcaagtggcacgctcagtgcgggggctattttgcgcaacatggccctg
gcagcgacgggttcggtgtcctatctgtccacgttgtacaccaaccagtcggttaccgca
gaagccaaggcgttgaaagcggcaggcatgggcggtgcaacacctatgctggaccgtacc
gagacggctttgaataacatccgtcatccgaacagggagtctctgccacatacgttccag
aagagcacgttgagcggtatcccacgagtcgcggaaaacgcctatcacatgggacgaggc
gcattgcagttgcctacccagatggccgtggatacggttcgggtcgtggatgaaggtgtg
ttgaacgcagtcgcgtcagcacgcgaggcgcttaagcagccgacaaaagacgatgacgca
ttgagggcacttgaagagggcttgcttgacccgcgttaa
DBGET
integrated database retrieval system