Pseudomonas syringae pv. tomato DC3000: PSPTO_1472
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Entry
PSPTO_1472 CDS
T00118
Symbol
ffh
Name
(GenBank) signal recognition particle protein Ffh
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02024
Quorum sensing
pst03060
Protein export
pst03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PSPTO_1472 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSPTO_1472 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPTO_1472 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pst02044
]
PSPTO_1472 (ffh)
Enzymes [BR:
pst01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PSPTO_1472 (ffh)
Secretion system [BR:
pst02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PSPTO_1472 (ffh)
Eukaryotic Sec-SRP protein
PSPTO_1472 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
APS_kinase
AAA_33
AAA_26
cobW
YqeC
6PF2K
AAA_31
KTI12
AAA_18
Thymidylate_kin
ParA
nSTAND3
AAA_30
AAA_16
AAA_24
AAA_28
ATP_bind_1
AAA_19
NACHT
TsaE
Mur_ligase_M
AAA_14
AAA_5
SLFN-g3_helicase
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAO54993
UniProt:
Q886V3
LinkDB
All DBs
Position
1617559..1618935
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLNEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLVLNVTPPAVILMAGLQGAGKTTTAGKL
ARFLKERKKKTVMVVSVDVYRPAAIKQLETLANDIGVTFFASDISQKPVDIALAAIKEAR
LKFIDVVIVDTAGRLHVDVEMMGEIQALHAATKPAETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPDRIASRILGMGDV
LSLIEQAEQTLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV
NLSQMGNAQGAAEKQFKQMEAIINSMTPAERRDPDLISGSRKRRISQGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMLPGGGMPKM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatctgactgaccgcctctcacagacgctgcgccacgttactggcaaggcc
aagctgaacgaggacaacatcaaagataccttgcgcgaagtgcgtatggcgttgctcgaa
gccgacgtcgccttgccggtggtcaaagacttcgtcaacagcgtcaaggagcgtgctgtc
ggcaccgaggtgtcgcgcagcctgacgccgggccaggcgttcgtgaagatcgtccaggcc
gaactcgaaagcctgatgggcgccgccaacgaagacctggtgctcaatgtcacgccgcct
gcggtcatcctcatggctggcttgcagggtgcgggcaagaccaccactgccggcaagctg
gcgcggttccttaaagagcgcaaaaagaaaaccgtgatggtggtgtcggtcgacgtttac
cgtcccgccgccatcaagcagcttgaaaccctggccaacgacatcggcgtgacgttcttc
gcgtccgacatcagccagaagccggtggacatcgccctggctgccatcaaggaagccagg
ctgaagttcatcgacgtggtcatcgtcgataccgccggtcgtctgcacgtcgatgtcgag
atgatgggcgagatccaggcgctgcacgctgcgaccaagccagccgaaacgctgttcgtg
gtcgatgccatgaccggtcaggatgcggccaacaccgccaaggcattcggcgatgcgctg
ccgctgaccggtgtcatcctgaccaaggtcgacggtgatgctcgtggcggtgctgcactg
tcggtgcgtgcaatcaccggcaagccgatcaagttcatcggtatgggcgagaagagcgag
gcgctggagccgttccacccggaccgtatcgcttcgcgaatcctcggcatgggcgacgtg
ctcagtctgatcgagcaggccgaacagaccctcgacaaggacaaagccgacaaactggcg
aaaaaactcaagaagggcaaaggcttcgatctcgaagacttccgcgaccagttgcagcag
atgaaaaacatgggcggccttggtggcctcatggacaaactgccaagcatcggcggcgtc
aacctgtcgcagatgggcaacgcccagggcgcagccgagaaacagttcaagcagatggaa
gcgatcatcaactcgatgacgccagccgagcgccgcgacccggacctgatcagcggctcg
cgcaagcgccgtatctctcaggggtcgggcactcaggttcaggatatcgggcgtctgatc
aagcagcacaaacagatgcagaagatgatgaagaagttctccgccaagggcggaatggcg
aaaatgatgcgcggcatgggtggaatgctccccggcggcggcatgccgaaaatgtaa
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