Pseudomonas syringae pv. tomato DC3000: PSPTO_1488
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Entry
PSPTO_1488 CDS
T00118
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03410
Base excision repair
pst03430
Mismatch repair
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSPTO_1488 (recJ)
03430 Mismatch repair
PSPTO_1488 (recJ)
03440 Homologous recombination
PSPTO_1488 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_1488 (recJ)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PSPTO_1488 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSPTO_1488 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PSPTO_1488 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AAO55009
UniProt:
Q886T8
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All DBs
Position
1635953..1637662
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AA seq
569 aa
AA seq
DB search
MRIEPRPLPDTLPFLGDLPPLLTRLYAARGVACEAELDKSLARLIPYQQLKGIDAAVDLL
VTALREGQRMLIVCDFDADGATACTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALQREPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLPGHELPAADAIVNPNQPGCTF
PSKSLAGVGVIFYVLMALRARLRDTGWFDQRAQPNLGELLDLVALGSVADVVPLDANNRI
LVHQGLMRIRAGRARPGLRAILEVARREPARITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLCDDPTRAREMAVQLDELNQDRKSIEQGMQREALAQLKDLPMESMPFGLCLFDAEWHQG
VIGILASRLKERYHRPTIAFASAGEGVLKGSARSVPGFHIRDALDAVAAGHPHLISKFGG
HAMAAGLSLPEDNFPAFAEAFDLEVRRQLDEQDLTGRLLSDGSLAVEEFHLELARALRNA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKMVLKTECGSVRLDGIAFSVDRDIWPNPNIR
WVELAYKLDLNEFRGNETVQLMVVHIAPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgaacctcgtccgttgcccgacactttgccgtttcttggcgacctgccgccc
ttgctcacacgtctgtacgcggccagaggtgtggcatgcgaggccgagctggacaaaagc
ctggcgcgactgatcccctatcagcagctcaaaggtatagatgcagctgtagacctgctg
gtgaccgccctgcgtgaaggtcagcgcatgctgatcgtctgcgacttcgatgccgacggc
gcgaccgcctgtacggtcggagtgctgggcctgcgtttgctgggtgcggcgcacgttgat
tatctggtgcccaaccgctttgaatacggctacggcctgaccccggaaatcgtcgaagta
gctctgcagcgcgagccgcagctgctgatcaccgtggataacggcatttcaagtgtcgag
ggcgtggcggcggccaaggcggcaggcttgcaagtgctggtcaccgaccaccacttgccc
ggtcacgagcttccggcggcagacgccatcgtcaacccaaatcagccagggtgcaccttt
cccagtaaatcgctggcgggcgtgggggtgatcttttacgtgttgatggccctgcgagca
cgcttgcgtgacaccggctggttcgatcagcgtgcccagcccaatctgggcgaactgctc
gatctggtggcgctgggcagcgtcgctgacgtcgtgccgctggacgccaataaccgcatt
ctggtgcaccaggggctgatgcgtatccgtgcgggccgcgcccgccccgggctgcgcgcg
attctggaagtcgcacggcgtgagcctgcgcgcatcacttcaacggacctggggttcatt
ctgggcccgcgcctgaacgcggcggggcgtctggatgacatgagcctgggcatcgaatgc
ctgctctgcgacgatccgacacgggcgcgggaaatggccgtgcaactggacgaactgaat
caggaccgcaagtccatcgagcagggcatgcagcgcgaagcacttgcgcagctcaaggac
ctgccgatggagtccatgccgttcgggctgtgcctgttcgatgcggagtggcatcagggc
gtcatcggtattctcgcctcgcggctcaaggagcgttaccaccggcccaccatcgcgttt
gccagtgccggggagggcgtgctcaagggctcggcacgctcggtgccgggttttcacatc
cgtgacgcgctggacgccgtggccgcgggtcaccctcacttgatcagcaagtttggcggg
cacgccatggcggcaggcctctcgctgcccgaagataactttccggcgtttgccgaggcg
ttcgacctggaagtgcgccgccagctggatgaacaggaccttaccgggcgcctgctgtct
gacggctcgctggcggtcgaagagtttcacctggagctggcccgcgccctgcgcaatgca
ggcccttggggtcagcatttccctgagccgctgtttcatggtgtatttcagctggtcgag
caacgcgtcgtgggcgaacgacatttgaagatggtgctcaagaccgaatgtggcagcgtg
aggctggacggtatcgcgttcagcgtcgaccgcgacatctggcccaaccccaatattcgc
tgggtcgagctggcttataaactcgacctcaacgagtttcgcggcaacgaaaccgtgcaa
ttgatggtggtgcacatcgcgccacgctga
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