Pseudomonas syringae pv. tomato DC3000: PSPTO_1622
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Entry
PSPTO_1622 CDS
T00118
Name
(GenBank) glycine betaine-binding protein, putative
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSPTO_1622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_1622
Transporters [BR:
pst02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
PSPTO_1622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
AAO55142
UniProt:
Q886F7
LinkDB
All DBs
Position
1779033..1780019
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AA seq
328 aa
AA seq
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MITVAFAACHCAWRRSKRAGCGSGLENNVDEARQPSVQTSGEAIMMMRKILGAGAALVLA
VSSTLAIAETKTLTIGYVEGWSDSVATTFVASEVIKQKLGYDVKLQSVAAGIMWQAVATD
KLDLMLSAWLPGTHGEYYTKYKDQVVNYGPNFKDAKIGLIVPEYVKAKSIEDLKTDASFN
KKITGIDAGSGVMLKTDQAIKDYGLDGYKLQASSGAGMIAELTRAEKAQKAIVVTGWVPH
WMFAKWKLRFLDDPKGVYGAAETVDNVASLTLEKKAPEVVAFLKKFQWASKDEIGEVMLA
IQDGAKPEAAAKDWVAKHPDRVAAWTAK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgattacggtcgcatttgctgcgtgtcactgcgcgtggcggcgatcaaagcgtgcgggg
tgtgggagcggtcttgaaaacaacgttgacgaagcccgacaaccgtcggtgcagacttcc
ggggaagcgataatgatgatgcgaaaaatactgggggcgggtgccgctctggtacttgcg
gtcagctccacgctagcgattgctgaaaccaaaaccctgaccatcggctatgtagaaggc
tggtccgacagcgtggcaacgaccttcgtggcctccgaggtgatcaagcagaagctgggc
tacgacgtcaaactgcagtcagtcgcggccgggatcatgtggcaggcagtggcgaccgac
aagctggacctgatgctgtctgcctggcttccgggcactcacggtgagtactacaccaag
tacaaggaccaggtcgtcaactatggccccaacttcaaggacgcgaagatcggcctgatc
gtgcccgagtatgtaaaagccaaaagcatcgaagacctgaagaccgacgcctccttcaac
aagaagatcaccgggatcgatgcgggctcgggcgtgatgctcaagaccgatcaggccatc
aaggattacggcctggatggctacaaactgcaggccagttccggcgcaggcatgattgcc
gagctgacccgcgccgagaaggcgcaaaaggccatcgtggtgacgggctgggtaccgcac
tggatgttcgccaagtggaaactgcgtttcctcgacgaccctaaaggcgtctatggcgct
gctgaaactgtcgataacgtcgccagcctgacgcttgagaaaaaagcgccggaagtcgtc
gccttcctgaaaaaatttcagtgggcctccaaggatgaaatcggtgaagtgatgctggct
attcaggacggtgccaagcccgaagctgccgcaaaggactgggtggccaagcacccggac
cgggtcgctgcatggaccgctaaatag
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