Pseudomonas syringae pv. tomato DC3000: PSPTO_1693
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Entry
PSPTO_1693 CDS
T00118
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pst03009
]
PSPTO_1693
Enzymes [BR:
pst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PSPTO_1693
Ribosome biogenesis [BR:
pst03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSPTO_1693
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Methyltransf_11
Methyltr_RsmB-F
Cons_hypoth95
Methyltransf_15
Methyltransf_23
PCMT
PabTrmU54_TRAM_dom
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
AAO55213
UniProt:
Q885Y8
LinkDB
All DBs
Position
1862367..1863722
Genome browser
AA seq
451 aa
AA seq
DB search
MAKHERGLRFQPTGGVKSVQIPAGKKQRLSIERLSDDGRGIAFLEGKTWFVAGSLAGEEV
EARVLNARGKVVEARTERVFVASDLRRAPACDYFGRCGGCSVQHVPHEEQLALKQRMLAE
QLLRVANVVPDEWAAPLSGAELAYRRRARVAVRWDAKAKRLDVGFRAAASQDIVSIEECP
VLVQALQPIMSQLPAMLKSFSKPQVLGHVELFSGSSTAVLLRHTAPLAEADLATLQAFCK
THGAQLWLHGEGEPQPASPGDTLGYRLEPWNLQLAWRPGDFIQVNAAVNTAMIEQALHWL
APAADERVMDLFCGLGNFALPLASLAKDVVAVEGVATMVERAAVNAMSNDLHNVRFFQAD
LSQPLTHADWAAEGFSAVLLDPPRDGAFEVVRQIRKTGAQRLLYVSCNPATLARDTVELV
KQGYRLKRAGILDMFPQTAHVEAMALFEVSK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcatgaacgaggcctgcgcttccagcccacgggcggcgtcaagagcgtgcag
attcctgccggtaaaaagcagcgtctgagcatcgaacggctgtccgatgacggtcgtggc
attgcgtttcttgagggcaagacctggttcgtcgcgggcagtctggccggtgaagaggtc
gaggcgcgggtgctcaatgcgcgcggcaaggtggtcgaagcgcgcaccgagcgggtgttt
gtcgccagcgacctgcgacgcgccccggcctgtgattattttggccgttgtggcggatgc
agcgttcagcatgtgccccacgaagaacagcttgccctgaaacagcgcatgctcgccgag
cagttgttgcgcgtggcgaacgtggtgccggatgaatgggccgcgccgttgagcggcgcc
gaactggcctaccgcaggcgcgcgcgggtcgcggtgcgctgggatgccaaggccaaacgg
ctcgacgtgggctttcgtgcggcggccagccaggacatcgtcagtatcgaagagtgtccg
gtgctggtacaggccttgcaaccgatcatgagtcagttgccggccatgctcaaaagtttc
agcaaaccgcaagtgttgggtcacgtcgagctgttcagcggctcttccactgcggtgttg
ctgcgtcacaccgcgcctttggcggaggctgatctggcaacgctgcaagcgttttgcaag
acgcatggcgcgcagctctggctgcacggtgaaggtgagccacagccggccagcccaggc
gatacgctgggttaccggcttgaaccgtggaacctgcaactggcatggcgaccgggagat
ttcattcaggtcaacgcggcggtcaataccgcgatgatcgagcaggcgctgcactggctg
gcacctgcggctgatgaacgagttatggacctgttttgcggcttgggcaacttcgccctg
ccgctggcgagtctggcaaaagacgtggtggcggtcgaaggcgttgcgaccatggtcgaa
cgtgcagcggtcaacgcaatgagtaatgatctgcacaatgtgcggttttttcaggcggat
ctttcccagccgctgacacacgccgactgggcggcagaggggttttctgcggtactcttg
gacccaccgcgtgacggagcctttgaagtggtgcgccagatcagaaaaacaggcgctcaa
cggttgctttatgtctcatgcaacccggcaaccttggctcgtgacacggtcgaactggtt
aaacagggctaccgattaaaacgtgccggaattcttgatatgtttccacaaacggcgcat
gtcgaggcgatggctttatttgaagtgagtaagtga
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