Pseudomonas syringae pv. tomato DC3000: PSPTO_1756
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Entry
PSPTO_1756 CDS
T00118
Symbol
wbpM
Name
(GenBank) nucleotide sugar epimerase/dehydratase WbpM
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00541
Biosynthesis of various nucleotide sugars
pst00552
Teichoic acid biosynthesis
pst01100
Metabolic pathways
pst01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSPTO_1756 (wbpM)
00552 Teichoic acid biosynthesis
PSPTO_1756 (wbpM)
Enzymes [BR:
pst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
PSPTO_1756 (wbpM)
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
CoA_binding_3
adh_short
NAD_binding_4
NAD_binding_10
GFO_IDH_MocA
wHTH_TTC3
Motif
Other DBs
NCBI-ProteinID:
AAO55276
UniProt:
Q885S5
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Position
1927805..1929799
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AA seq
664 aa
AA seq
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MSRLRASLLALPRRKKRIIQVAADVLLVWLALWMSFVVRLGIDELINPLEKHTWLFISAP
LAAIPLFIRFGMYRAVMRYFGNDALIAIIKAVTMSSLILGCMVYVYSNHQQLVPRSVIFN
YWWLSLVMIGGLRLAMRQYFLGDWFAAAQHVPFAKSDNGLQKVAIYGAGAAGNQLVAALR
MGRLMHPVAFIDDDESISNRVISGLQVYKPRNIQRMIDSTGAQEILLAIPSSSRGRRREI
LGFLEGFPLHVRSVPGFMDLAAGRVKVDDLQEVDIADLLGRDAVPARENLLEHCIKGKTV
LVTGAGGSIGSELCRQILLLQPVQLLLLDHSEFNLYSILSELEQRSARESLSVKLLPILG
SVRNHPKLLSIMKTWKVDTVYHAAAYKHVPMVEHNIAEGVINNVVGTLNTAQAALQAGVS
NFVLISTDKAVRPTNVMGSTKRLAELILQALSRETAPVIFGDKANVYQVNKTRFTMVRFG
NVLGSSGSVIPLFHKQIQSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGHGGDVFVLD
MGEPVKIVELAEKMIHLSGLAIRSEKNPHGDISIEFTGLRPGEKLYEELLIGDNVVATEH
PMIMSASEDCLAWDVLKGRLVKLLDAVERDDYNSVRQLLRETVSGYTPEGEIVDWMYQER
SGEP
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggttgcgagctagtttgctggccctaccacgccgcaaaaagcgaataatccag
gtggctgccgacgttcttctggtctggcttgcgctgtggatgtcgtttgtcgtgcggctg
ggcattgacgaactgatcaatccgctggaaaagcacacttggcttttcatcagtgcgccg
ctggcggccattccgttgttcatccgttttggcatgtaccgtgcggtcatgcgctatttt
ggcaacgacgcactgattgcgatcatcaaagccgtcacgatgtcgtcgttgattctcggt
tgtatggtgtacgtatacagcaatcaccagcaactggtgccacgctcggtcatcttcaac
tattggtggctgagcctggtaatgatcggcggtctgcgcctggccatgcggcagtacttc
ctcggtgactggtttgcggcggcgcaacacgtaccgtttgccaaaagcgataacggcctg
caaaaagtcgccatctacggcgcaggcgcggccggcaaccagttggtggctgcattgcgt
atggggcgtctgatgcaccctgtggcattcattgatgatgacgagtcgatctccaaccgg
gtgatttccgggctgcaagtctacaagcctcgaaatatccagcgcatgatcgattccacc
ggggctcaggaaatactcctggccatcccttcgtcatcgcgcgggcgtcgccgggagatt
ctggggtttctggaaggctttccgttgcacgtgcgaagcgtccccggtttcatggacctg
gcggctggccgggtcaaggttgacgaccttcaggaagtcgatatcgccgaccttctggga
cgagacgcagtgcctgcccgggaaaacctgctggagcattgcatcaagggcaagacggtg
ctggtgactggcgcgggcggctcgatcggttccgagttgtgccggcagatactgcttctg
cagcctgtccagttgctgttgctcgaccacagcgaattcaatctttacagcattctgtcc
gagcttgaacagcgttctgcccgtgagtctctttcggtcaagttgctgcccatactcggt
tcggtgcgcaatcaccccaagctgctgtcgatcatgaaaacctggaaggtcgacacggtc
taccatgcggccgcctacaagcacgtaccgatggttgagcacaacattgccgaaggtgtg
atcaataacgtcgtcggtacgctcaataccgcgcaggcggcgttgcaggcgggggtttcc
aactttgtcctgatttccaccgacaaggcggtccgtccaaccaacgtcatgggcagcacc
aagcgccttgccgagttgatcctgcaggcactgagccgcgagaccgcgccggtgatcttc
ggcgacaaggccaacgtctatcaggtcaacaagacccgtttcacgatggttcgtttcggc
aacgtgcttggctcatcgggctctgtgattccgctgtttcacaagcagattcagtcgggc
gggccgctgacggtgactcatcccaagatcacccggtacttcatgaccatccccgaggcc
gctcaactggttattcaggcgggctcgatggggcatggcggggatgtgttcgttctggac
atgggcgagccagtcaagattgtcgaactggcggagaaaatgatccacctttccggcctg
gccatccgctccgagaaaaacccgcatggcgatatctccattgagttcaccgggctgcgt
cccggtgaaaagctgtatgaagagctgctgatcggcgacaacgtggtcgcgaccgaacac
ccaatgatcatgagcgccagcgaagactgtctggcgtgggatgtattgaaaggccggctg
gtaaaactgctggatgccgtggagcgagacgattacaacagcgtgcgccagttgctgcga
gaaacagtcagcggttatacaccagagggtgaaatcgttgactggatgtatcaggaacgc
agcggcgagccttga
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