Pseudomonas syringae pv. tomato DC3000: PSPTO_2099
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Entry
PSPTO_2099 CDS
T00118
Name
(GenBank) helicase/SNF2 family domain protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SNF2_assoc
SWIM
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAO55617
UniProt:
Q884J3
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Position
complement(2268366..2271122)
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AA seq
918 aa
AA seq
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MSSILEKVLASAWTDLFNDRTLERGRDYARQKRIVLEDSSPQIIRTACRGSGLEIYTQTL
LFKDPDRYKNYLTCKCTCPVRNDCKHCVAALLFLKDPQNRPLLQAALGSHQRETEQHVEQ
QIAQKPRLPERLIDDLQPRPRLILASIEFSAYEPRNGRMQRHIQHRAALAFAYGKHYAVG
TTNVSILVSSLGSDLVNQKSDIIEHTETETLRIRRQGEKERQLRQELADLGFKVATRQSK
ALPDSAGDMYELPNDKAWLHFVLDDLPRLREQGWEIEIQEEFGFDVTPVDDWYAVIDEET
ERDWFDLELGIIVNGERLSLLPILINLIRSHPELMSPSAVAKRGDEEQLLVQLNHFTQSG
GSPVQIALPYGRLKPVLATLGDFYWRQDGNNALRMSKADAARLTQLEDLPLTWQGGDRLR
HFAERLINIKDAPVNLPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTL
AHLLMEKQAGRLDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGANRHQDAGNLQDYD
LILTTYALLPRDMEMLEKQPLHVLILDEAQYIKNPNSKAAQAARNLTARQRLCLSGTPLE
NHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRLHHLNARIKPFLLRRTKEQV
ATELPPKTEIIHWVDLNDAQRDVYETVRLAMDKKVRDEITRKGVARSQIIILEALLKLRQ
VCCDLRLVNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQ
RGIAYALLTGSTRDRRTPIHDFQSGKLPIFLISLKAGGTGLNLTAADTVIHYDPWWNPAA
ENQATDRAYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVLDGRTTGDWKLRDE
DLQALFAPLPAAPKKTRK
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtccattctcgaaaaagtcctggcttcggcctggacagacttattcaacgatcga
acgcttgagcgggggcgcgactacgcccggcaaaaacgcatcgtgctggaagactccagc
ccgcagatcatccgcaccgcgtgcaggggctcgggccttgaaatctatacccagactctg
ctgttcaaggacccggatcgctacaagaattacctgacctgcaaatgcacctgcccggta
cgcaacgattgcaagcactgcgtggccgcgctgctgtttctcaaggacccgcaaaaccgg
ccactgctgcaagccgcgctgggttcgcaccagcgggaaacagagcagcacgtcgagcag
cagatcgcgcaaaagccccggctgccggaacgcctgatcgatgatctgcaaccgcgcccc
aggctgattctggccagtatcgagttcagcgcctacgagccacgtaacgggcgcatgcag
cggcatattcaacatcgtgccgcgctcgcctttgcctacggcaagcattacgccgttggc
accaccaacgtgagcattctggtcagttcgctgggcagtgatctggtcaaccagaaaagc
gatatcatcgaacacaccgaaaccgagacgctgcgcatacgtcgtcagggcgaaaaagag
cggcagctgcgtcaggagctggccgacctgggcttcaaggtcgccacccggcagagcaag
gcgttgcctgacagcgcgggcgacatgtacgagctgcccaacgacaaggcctggctgcat
ttcgtgcttgatgacctgccacggttgcgcgaacagggttgggaaatcgagattcaggaa
gaattcggctttgacgtcacgccggtcgatgactggtatgcagtcatcgacgaagagacc
gaacgcgactggttcgacctggaactgggcatcatcgtcaacggtgaacgcctgagcctg
ctgccgatcctgatcaacctgatccgcagccaccccgaactgatgagcccgtcggcggtg
gccaagcgcggcgacgaagaacaactgctggtccagctcaaccacttcacccagagcggt
ggcagcccggtgcagattgccctgccatacggccggctcaagccggtactggcgacattg
ggtgacttctactggcggcaggacggcaacaacgcgctgcgcatgagcaaagccgatgcg
gcgcgcctgacccagctcgaagacctgccactcacctggcagggcggcgaccgtctgcgc
catttcgccgagcgcctgatcaacatcaaggacgcgccggtcaacctgcccgacggcctg
aatgccacactgcgtccgtatcagctggaaggcctgagctggatgcagtcattgcgcgag
ctggaagtcggcggcgtgctggccgatgacatgggcctgggcaagaccctgcagaccctg
gctcacctgctgatggaaaaacaggccggacgccttgaccgccctgcgctggccgtcatg
ccgaccagcctgattcccaactggctggatgaagccgagcacttcaccccggacctcaag
gtgctggcgctgtatggcgccaatcgccatcaggacgcgggcaatctacaggattacgat
ctgatcctgaccacttacgcactgctgccccgggacatggagatgctcgaaaagcagccg
ctgcatgtgctgattctcgatgaagcgcagtacatcaagaaccccaacagcaaggccgcg
caggccgcgcgcaacctcactgcccgtcagcgcctgtgcctgagcggtacgccgctggaa
aaccacttgggcgagctgtggtcgctgttccacttcctgatgcccggctggctgggcaac
agcaaggaattcaacagcaactaccgcacggccattgaaaagcacggcaatcaggaccgc
ctgcatcacctcaatgcgcgcatcaagccgttcctgctgcgccgtaccaaggaacaggtc
gccaccgaactgccgcccaaaaccgagatcattcactgggtcgacctcaacgacgcccag
cgcgatgtgtacgaaaccgtgcgcctggcgatggacaagaaagtcagggacgagatcacc
cgcaagggcgtggcgcgcagccagatcatcattctggaggcgctgctcaagctgcgtcag
gtgtgctgcgacctgcggctggtcaaccacgacatgccggtcaacagcaaacaaggcacg
tcaggcaagctcaacagcctgatggaaatgttcgaagaactgctggccgagggccgcaag
atcctgctgttctcgcagttcacctcgatgctgagcctgatcgaagaagaattgaaacag
cgcggcattgcctacgcactgctgaccggctcgacccgcgaccgacgcacgccgattcac
gacttccagagcggcaagctgccgatcttcctgatcagcctgaaagccggcggcaccggc
ctcaacctgaccgccgccgacaccgtgatccactacgacccatggtggaacccggcagcg
gaaaatcaggcgaccgaccgcgcctaccgcatcggccaggacaaaccggtgttcgtttac
aagatgatcgcgcgcggcaccgtggaagagaaaatccagcgcctgcaacgggaaaaatcc
gcgctggcagccggcgtactggatggccgtaccaccggcgactggaagctgcgcgatgaa
gacctgcaggccctgttcgcgcccttgcctgccgcgccaaagaagacccgcaagtga
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