Pseudomonas syringae pv. tomato DC3000: PSPTO_2198
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Entry
PSPTO_2198 CDS
T00118
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase, iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00020
Citrate cycle (TCA cycle)
pst00190
Oxidative phosphorylation
pst00650
Butanoate metabolism
pst00720
Other carbon fixation pathways
pst01100
Metabolic pathways
pst01110
Biosynthesis of secondary metabolites
pst01120
Microbial metabolism in diverse environments
pst01200
Carbon metabolism
Module
pst_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pst_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pst_M00149
Succinate dehydrogenase, prokaryotes
pst_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSPTO_2198 (sdhB)
00650 Butanoate metabolism
PSPTO_2198 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
PSPTO_2198 (sdhB)
00720 Other carbon fixation pathways
PSPTO_2198 (sdhB)
Enzymes [BR:
pst01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PSPTO_2198 (sdhB)
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GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer4_9
Fer4_7
Fer4_18
Fer4_2
Fer4
Motif
Other DBs
NCBI-ProteinID:
AAO55714
UniProt:
Q883Z8
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All DBs
Position
2418510..2419214
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AA seq
234 aa
AA seq
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MLQVSVYRYNPDQDAAPFMQEFQVDTGGKDLMVLDVLALVKEQDEGFSYRRSCREGVCGS
DGMNINGKNGLACITPLSAVVAKNKLVVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQN
DTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTRTNERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQSGI
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagtcagtgtttatcgttacaaccctgatcaggacgctgctccgttcatgcag
gagtttcaggtcgataccggtggcaaggacctgatggtgctggacgtgctggcgctggtc
aaagaacaggacgaaggcttttcgtaccgtcgttcgtgccgtgaaggcgtgtgcggctcc
gatggcatgaacatcaatggcaagaacggcctggcgtgcatcacgccgctgtctgcggtt
gtcgccaagaacaagctggttgtccgtcctctgccaggtttgccggttattcgtgacctg
gtcgtcgatatgagcatcttctacaagcaatacgagaaggtgaagccattcctgcagaac
gacacgccggctccggccatcgaacgtctgcaaacgccagaagagcgcgaaaagctcgat
ggtctgtacgagtgcattttgtgcgcttgctgctcgacctcctgcccgtccttctggtgg
aaccccgacaagttcctcggtccagctgcactgctgcaagcctatcgtttcctggctgac
agccgtgacacccgcaccaacgagcgtctggcttcgcttgatgacccgttcagcgtattc
cgctgccgcggcatcatgaactgcgtcaacgtatgtccgaagggcctgaacccaaccaag
gctatcggtcacgtgcgcaacatgttgttgcaaagcggcatctga
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