Pseudomonas syringae pv. tomato DC3000: PSPTO_2299
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Entry
PSPTO_2299 CDS
T00118
Symbol
oprF
Name
(GenBank) outer membrane porin OprF
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_2299 (oprF)
Transporters [BR:
pst02000
]
Other transporters
Pores ion channels [TC:
1
]
PSPTO_2299 (oprF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OprF
OmpA
OMP_b-brl
DUF748
TSP_3
Motif
Other DBs
NCBI-ProteinID:
AAO55813
UniProt:
Q883Q1
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All DBs
Position
2542838..2543872
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AA seq
344 aa
AA seq
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MKLKNTLGLAIGTIVAATSFGALAQGQGAVEIEGFAKKEMYDSARDFKNNGNLFGGSIGY
FLTDDVELRLGYDEVHNVRSDDGKNIKGANTALDALYHFNNPGDMLRPYVSAGFSDQSIG
QNGRNGRNGSTFANIGGGAKLYFTDNFYARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGS
KKVEAAPAPVAEVCSDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDF
NKSVVKPNSMGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVN
QYGVGASRVNSVGYGESRPVADNATDAGRAVNRRVEAEVEAQAK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaaaacaccttgggcttggccattggtactattgttgccgcaacttcgttc
ggcgcgctggctcaaggccaaggcgcagtcgaaatcgaaggcttcgccaagaaagaaatg
tacgacagcgcccgtgacttcaaaaacaacggcaacctgttcggcggctcgattggctac
ttcctgaccgacgacgttgaattgcgtctgggctacgacgaagttcacaacgttcgtagc
gatgatggcaagaacatcaagggcgcaaacaccgctctggacgctctgtaccacttcaac
aacccaggcgacatgctgcgtccatacgtttctgccggtttctccgatcagagcattggc
cagaacggtcgcaacggtcgtaacggttccaccttcgccaacatcggcggcggtgccaag
ctgtacttcaccgacaatttctatgctcgtgctggcgttgaagctcagtacaacatcgac
caaggcgacaccgagtgggctccaagcgtcggtatcggcgtaaacttcggtggcggcagc
aagaaagttgaagcagcaccagctccagtagctgaagtgtgctccgacagcgacaacgac
ggcgtgtgcgacaacgtcgacaagtgcccagacaccccagccaacgtaactgttgacgct
gatggctgcccggcagttgctgaagtggttcgtgttgagctggacgtgaagttcgacttc
aacaagtctgttgtcaagcctaacagcatgggcgacatcaagaacctcgctgacttcatg
cagcagtacccacagaccaccaccactgttgaaggtcacactgactccgtcggtcctgac
gcttacaaccaaaaactgtccgagcgtcgtgcaaacgccgttaaacaggttctggttaac
cagtacggtgttggcgctagccgcgtaaactcggttggttacggcgaatcccgcccagtt
gctgacaacgcaactgacgctggccgtgcagtaaaccgtcgcgtagaagcagaagtagaa
gctcaagctaagtaa
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