Pseudomonas syringae pv. tomato DC3000: PSPTO_2547
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Entry
PSPTO_2547 CDS
T00118
Name
(GenBank) conserved hypothetical protein
KO
K11895
type VI secretion system protein ImpH
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSPTO_2547
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pst02044
]
PSPTO_2547
Secretion system [BR:
pst02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSPTO_2547
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
Motif
Other DBs
NCBI-ProteinID:
AAO56052
UniProt:
Q882S8
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All DBs
Position
2811942..2812949
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AA seq
335 aa
AA seq
DB search
METTDGAATAALNALCHDIREYSIYQAIPLILQMLRGIHPDADDQGIHDFLELRANPGLG
FPGSDIDCMALFYEQGHVHVRLDLNVMSLTGSGSPLPAFYAEQALEDRDKPNTTRDFVDI
FNHRLQKLMVPVWRKYRYHAAFTTGATDPFSEQLFALIGLHGERIRETTELNWKRLLPYL
GLLSLRAHSAALIESVLRYYFKHAQLFIEQCVERTVDITPPQLNRLGRANSRLAYDAVLG
SRVPDRGGKFRIHIKQLDWKRFHEFLPIGPDYPPLGALVRFTLRDPLDYDVCLELVHEDI
RDLRIGQSNACRLGWTSWLGREHALGLVTLNRPTH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacggatggggcagcaaccgctgctctgaacgcgctgtgtcatgacatcagg
gaatattcgatttatcaggccatcccgctgattttgcaaatgctgcgtgggattcaccct
gatgccgatgatcaggggattcatgactttctcgaactgcgggccaaccccggcctcggg
ttcccgggcagcgatattgactgcatggcgcttttttacgagcagggtcatgtgcatgta
cgactggatctcaatgtcatgagcttgactggatcagggtccccgttgcctgctttttac
gccgagcaagcactggaagaccgagacaagcccaataccacgcgagactttgtcgatatt
ttcaatcaccgcttacaaaaactgatggtgcctgtatggcgcaagtatcgctatcacgca
gcgtttaccaccggcgcaaccgatccattttccgagcaactgttcgccctgatcggtttg
catggggagcgcattcgcgaaactaccgagttgaactggaagcggttattgccctatctc
gggttgttgagcttgcgtgcgcattctgctgcgctgattgaatcggtgcttcgttactac
ttcaagcacgcacaattattcattgagcagtgcgttgagcgaacggttgacataactcct
ccgcaactcaaccgcctcggaagagccaatagccggttagcgtatgacgcagtgctgggc
agccgggttcctgatcggggcggcaagtttcgtattcacataaaacagctcgactggaag
cgtttccacgagtttctgcccattggccctgattacccgccactgggtgcgctcgtgcgg
ttcaccttgcgcgacccgctggattacgacgtctgtcttgagcttgtgcatgaagacatc
agagatttgcgcatcggccaatcaaacgcgtgtcgcctcggctggaccagttggttaggg
cgcgagcacgccttgggcctcgtgacgctcaacagaccgactcattaa
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