Pseudomonas syringae pv. tomato DC3000: PSPTO_2548 Help Entry PSPTO_2548        CDS       T00118                                  Name (GenBank) clpB protein, putative   KO K11907   type VI secretion system protein VasG Organism pst  Pseudomonas syringae pv. tomato DC3000 Pathway pst02025   Biofilm formation - Pseudomonas aeruginosa pst03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pst00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     PSPTO_2548  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     PSPTO_2548  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pst02044]     PSPTO_2548 Secretion system [BR:pst02044]  Type VI secretion system   Imp/Vas secretion system core components    PSPTO_2548 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 NBD_SMAX1 nSTAND3 Sigma54_activat AAA_7 Clp_N IstB_IS21 NACHT AAA_29 AAA_25 ResIII AAA_24 Hpr_kinase_C Motif Other DBs NCBI-ProteinID:  AAO56053 UniProt:  Q882S7 LinkDB All DBs Position 2812959..2815562 Genome browser AA seq 867 aa AA seqDB search MIDVDLQQLVKALDAPTRNELEGAAGRCVSRGSSQILVEDMLPGLLERPDGMLMRALSDA DVSTAEFAGLILVPVEHSVDRTPVFAAELVQWFQDALLIATLDLGQSHIDQAALILALLR NPLRYADRPYQPLLAKINIERFRDYVLSRQASGTARQAIHQSDSLLERFTHNLTQQAREG SLDPVLCRDDCLRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLALRIVRGEVPDLLKDV ELLSLDMGLLQAGASIKGEFERRLKGVIDEVKSSPGSFILFIDEAHTLIGAGANAGGSDA ANILKPALARGELRTIAATTWAEYRQYFEKDPALARRFQPVRVLEPTVEQAVTILRGLAP LYEQSHGVYLRDDAVVAAARLSARYISGRQLPDKAIDLLDTACARVQISLVAVPERLEHL RSEMVQQQRHLEAVQRDADAGLSVDDKVLSTLASSVSRIRKEAIVLEDAWLDQRKTARRV LDLRQQLAHRKIQQNALTTLDSDCQATQALESELAQAQQTILSTQLKDRLVSFEVCPRLV AQVVNAWTGIPLSQLVQEHSLSIADFSSDLRLRIRGQEQAVQVLERAVKASAAGLNAPNA PTGVFLLVGPSGVGKTETAIALADLLYGGERFLTTINMSEFQEKHTVSRLIGAPAGYVGY GEGGMLTDAVRQKPYSVILLDEVEKADPEVMNLFYQIFDKGVANDGEGREINFRNTLILM TSNLGGDLIHASCREGERPDADELAMRIKPLLTAHFKPALLARMRVVPYYPVTGVVLHEL IELKLSRLGERLECRGLTFSYSPDLTRYLLECCTQSDSGARLIDHVLESRVTPLIADRLL SAASSGDSVSRAHATLDASGGIVCEFE NT seq 2604 nt NT seq  +upstreamnt  +downstreamnt atgatcgatgtagacctgcagcaactcgttaaagccctggatgcccccacacgcaacgaa ctcgagggggccgcagggcgttgcgtgtccagaggcagtagccagattctcgttgaggat atgttgcctggcttgctggaacgaccggatggaatgctgatgcgtgcgctatcggacgca gatgtctcgactgccgaattcgcaggcctgatccttgtgcctgttgagcatagcgtcgac cgaaccccggtattcgccgccgaacttgttcaatggtttcaggacgcacttcttattgcc acgctggatttggggcagagtcacattgatcaggctgcgctgattcttgcgctgctgcgc aacccgttgcgttatgccgatcgtccctaccagccactcctggcgaaaatcaacattgaa cgctttcgggactatgtgctttccaggcaggcatccggcacagcaaggcaagcgatacat caatctgattcactgctcgaacgcttcactcataacctgacgcagcaggcccgagagggg tcgcttgatccggtgctgtgccgggacgactgcctgcggcagatggtcgacatactggct cgccgccgcaagaacaatccgattgtggtgggcgaggcgggtgttggcaaaactgcaatt gtcgaagggctggcgctgagaatcgttcggggtgaagttcctgacctattgaaagatgtc gaactgttgtctcttgatatgggcctgctccaggcaggtgccagtatcaaaggcgagttc gagcgtcgcttgaagggcgtcattgacgaggtcaagtcttcgccgggctctttcattctg ttcattgatgaagcccacactctgatcggcgcaggtgcaaatgctggaggctcagacgct gccaacattttgaagccagcactggcacgtggcgaactgcgcactatcgcggcaaccacc tgggccgaatatcgacaatactttgagaaggatccggcgcttgcacgtcgctttcagccg gttcgcgtgcttgagcccacggtcgaacaagccgtcaccatcctgcgcgggctcgctcca ctgtatgaacagagccatggcgtctatctacgcgacgatgcggtggtggccgctgcccgg ctgtcggcacgctatatatccggtcggcagctgccagacaaggcaatcgatctgcttgat acagcctgcgcccgagtgcaaatcagtctggtcgcggtgcctgagcgccttgagcatctt cgcagcgagatggttcagcagcagagacaccttgaggccgtgcagcgtgatgccgatgca ggcttgtcggtggatgacaaggtgttgagtacactggcatccagtgtgtcgcgtatccgc aaggaagccatcgtgcttgaagacgcctggcttgatcagcgaaaaaccgccaggcgggtg cttgatctgcgtcagcaacttgcccaccgaaaaatacagcagaacgctctgaccactctg gacagtgattgtcaggccacccaggcgctggagtccgaattggctcaggctcagcagacg atcctcagcacgcagctgaaagaccgtctggtgagcttcgaagtatgtcccaggttagtc gcgcaagtggtcaatgcctggaccggcataccgctgtcgcagctggtccaggaacacagc ctttccattgcagatttttcgtctgacctgcgtctgcgcattcggggacaggagcaggct gtgcaggttcttgaaagggcagtgaaggcgtcggcggcaggtttgaatgcgccgaatgca cctactggcgtgttccttctggtgggtcccagtggcgtgggcaagaccgaaaccgctatc gctctggctgatcttttatatggcggcgagcgctttcttacgacgatcaatatgtccgag tttcaggaaaagcatacggtctcacgcttgatcggcgcgcctgcgggctacgttggctat ggcgagggaggcatgttgaccgatgccgttcgacagaagccgtactcggtgattctgctt gatgaagtcgagaaggctgacccggaagtaatgaacctgttctatcagatattcgacaag ggtgtcgccaacgacggcgaaggccgggaaatcaacttccgcaacacgcttattctgatg acttccaatctgggcggtgatctgatccatgcgagctgccgagagggtgagcgtccggat gccgacgagctggctatgagaataaagccgctactcaccgcgcatttcaagcctgcttta ctggccaggatgcgagtagtgccttattaccccgttacgggggtggtgctccatgaattg atcgagttgaaactgagcaggcttggggaaaggctcgaatgccgcgggctgaccttcagt tattctccggatctgactcgctatctgcttgaatgctgcacccaaagcgacagcggtgcg aggttgattgatcacgtgctggagtcacgcgtgacgccgctcatcgccgaccgactgctg agtgccgcgagcagcggtgacagcgtctccagggcgcacgcaacacttgacgcttctggc ggcattgtctgtgagttcgaataa

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