Pseudomonas syringae pv. tomato DC3000: PSPTO_2552
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Entry
PSPTO_2552 CDS
T00118
Name
(GenBank) conserved hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSPTO_2552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pst02044
]
PSPTO_2552
Secretion system [BR:
pst02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSPTO_2552
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AAO56057
UniProt:
Q882S3
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Position
2817858..2819156
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AA seq
432 aa
AA seq
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MLLRPQHFQHNDRYYDHQLKVRTRLAGAFNWGFTALEIDRQFLSSGQIVLNQASGIFPDG
SVFDIGDRERPLALDIAPNTSNLSVYVALPIVAGNCIEARSQEQSDVFARFTAYAASVAD
SNAGEGSSTPVVCARPEFRLLLGEPQGEHTYVMLKLCHILICSPDKAITLDAEYSATFVN
AGGSRYLMSCLKEVTSLLQHRGDVIAARISSRGQASDAEVGDFMMLQLINRSALVLRHYL
ETRHLHPEELYRLLLTLLGELATFGTETRRPRLESSYQHTDQAATFRSVMLAIRQLLSMV
VEQHALELELQPRQYGVLVSPRIDGELLGTASFVLAARAQCDAEELRVRLPSHLKVGSVE
SIRELVALHLPGIRLRPLPVAPRQIPFHANKTYFVLDINDQEQIGIDKSGGFAFHVSGEF
SGLELQFWAIRN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgtccgcagcactttcagcataacgaccgttattacgatcatcagttgaaa
gtccgtacccgtctggcgggggccttcaactgggggttcacggcgctggaaattgatcgg
caatttctgagctctgggcagattgtgcttaaccaggcctcgggcatattcccggatggc
agcgtcttcgatatcggtgaccgtgagcgtccattggcgctggatattgcgcccaacact
tcaaacctgtcggtctatgtagcactgccgatcgtagcgggtaattgcatcgaggcacgc
agccaggaacagtcggatgtgttcgcgcgtttcaccgcctacgccgccagcgtcgcggat
tccaacgctggagagggcagttccacaccggttgtctgcgcgcgccccgagtttcgtctg
ctgctgggtgaaccacaaggcgagcacacctacgtgatgctcaagttgtgccatatcctg
atctgcagccctgacaaggcaataacactggacgctgaatactctgccacattcgtcaat
gccggcggttcccggtacttgatgtcgtgcctgaaggaggtcacaagcctgttgcagcac
cgaggcgatgtcattgctgcgcgcatcagttcgcgcggccaggccagcgatgccgaggtg
ggtgatttcatgatgttgcaattgatcaatcgcagtgcgttggtgcttcggcactatctg
gagactcgacatcttcaccctgaagagctgtatcgcttattgctgacgctactgggtgag
ctggcgacgtttggcactgaaacaaggcgccctcgactggaaagcagctaccaacataca
gatcaggcggcgacgttcaggagtgtgatgcttgccattcgacaattgttgtcgatggtc
gttgaacagcatgcgctggaactcgagttgcagcccaggcagtacggtgtgttggtttct
cctcgcatcgacggtgagctgctgggaaccgcctcatttgtgctggctgcccgcgcgcaa
tgcgatgccgaagaactgcgcgttcgattgccgtcgcacctcaaggtcggttctgtggag
agtatccgtgaactggtagcgttgcatcttcccggtatcaggctcaggccgctgcccgtg
gcaccccgacagatcccgtttcatgccaacaagacttacttcgttctcgacatcaacgat
caggagcagattggaatcgataagtccggagggttcgcctttcatgtgtcaggcgagttc
tcggggcttgaattgcagttttgggcgatcagaaactga
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